Lo Leggio Leila, Larsen Sine
Centre for Crystallographic Studies, Department of Chemistry, Chemical Institute, University of Copenhagen, Universitetsparken 5, DK-2100, Copenhagen, Denmark.
FEBS Lett. 2002 Jul 17;523(1-3):103-8. doi: 10.1016/s0014-5793(02)02954-x.
The crystal structure of Thermoascus aurantiacus endoglucanase (Cel5A), a family 5 glycoside hydrolase, has been determined to 1.62 A resolution by multiple isomorphous replacement with anomalous scattering. It is the first report of a structure in the subfamily to which Cel5A belongs. Cel5A consists solely of a catalytic module with compact eight-fold beta/alpha barrel architecture. The length of the tryptophan-rich substrate binding groove suggests the presence of substrate binding subsites -4 to +3. Structural comparison shows that two glycines are completely conserved in the family, in addition to the two catalytic glutamates and six other conserved residues previously identified. Gly 44 in particular is part of a type IV C-terminal helix capping motif, whose disruption is likely to affect the position of an essential conserved arginine. One aromatic residue (Trp 170 in Cel5A), not conserved in term of sequence, is nonetheless spatially conserved in the substrate binding groove. Its role might be to force the bend that occurs in the polysaccharide chain on binding, thus favoring substrate distortion at subsite -1.
嗜热毁丝霉内切葡聚糖酶(Cel5A)属于5家族糖苷水解酶,其晶体结构已通过多同晶置换加反常散射法测定,分辨率达1.62 Å。这是Cel5A所属亚家族结构的首次报道。Cel5A仅由一个具有紧密八重β/α桶状结构的催化模块组成。富含色氨酸的底物结合凹槽的长度表明存在底物结合亚位点-4至+3。结构比较表明,除了先前确定的两个催化谷氨酸和其他六个保守残基外,该家族中还有两个甘氨酸完全保守。特别是Gly 44是IV型C端螺旋封端基序的一部分,其破坏可能会影响一个必需保守精氨酸的位置。一个芳香族残基(Cel5A中的Trp 170),虽然在序列上不保守,但在底物结合凹槽中空间位置保守。其作用可能是促使多糖链在结合时发生弯曲,从而有利于亚位点-1处的底物变形。