Scheiner Steve, Kar Tapas, Pattanayak Jayasree
Department of Chemistry & Biochemistry, Utah State University, Logan, Utah 84322-0300, USA.
J Am Chem Soc. 2002 Nov 6;124(44):13257-64. doi: 10.1021/ja027200q.
Ab initio calculations are used to compare the abilities of the aromatic groups of the Phe, Tyr, Trp, and His amino acids (modeled respectively by benzene, phenol, indole, and imidazole) to form H-bonds of three different types. Strongest of all are the conventional H-bonds (e.g., OH..O and OH..N). His forms the strongest such H-bond, followed by Tyr, and then by Trp. Whereas OH..phi bonds formed by the approach of a proton donor to the pi electron cloud above the aromatic system are somewhat weaker, they nonetheless represent an important class of stabilizing interactions. The strengths of H-bonds in this category follow the trend Trp > His > Tyr approximately Phe. CH.O interactions are weaker still, and only those involving His and Trp are strong enough to make significant contributions to protein structure. A protonated residue such as HisH(+) makes for a very powerful proton donor, such that even its CH..O H-bonds are stronger than the conventional H-bonds formed by neutral groups.
从头算计算用于比较苯丙氨酸、酪氨酸、色氨酸和组氨酸的芳香基团(分别用苯、苯酚、吲哚和咪唑模拟)形成三种不同类型氢键的能力。其中最强的是传统氢键(例如,OH…O和OH…N)。组氨酸形成的这种氢键最强,其次是酪氨酸,然后是色氨酸。虽然质子供体靠近芳香体系上方的π电子云形成的OH…π键稍弱,但它们仍然是一类重要的稳定相互作用。此类氢键的强度大致遵循色氨酸>组氨酸>酪氨酸>苯丙氨酸的趋势。CH…O相互作用更弱,只有涉及组氨酸和色氨酸的那些相互作用强到足以对蛋白质结构做出显著贡献。一个质子化的残基,如HisH(+),是一个非常强的质子供体,以至于即使它的CH…O氢键也比中性基团形成的传统氢键更强。