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超快表面水合动力学与蛋白质功能表达:α-胰凝乳蛋白酶

Ultrafast surface hydration dynamics and expression of protein functionality: alpha -Chymotrypsin.

作者信息

Pal Samir Kumar, Peon Jorge, Zewail Ahmed H

机构信息

Laboratory for Molecular Sciences, Arthur Amos Noyes Laboratory of Chemical Physics, California Institute of Technology, Pasadena 91125, USA.

出版信息

Proc Natl Acad Sci U S A. 2002 Nov 26;99(24):15297-302. doi: 10.1073/pnas.242600399. Epub 2002 Nov 11.

Abstract

We report studies of hydration dynamics at the surface of the enzyme protein bovine pancreatic alpha-chymotrypsin. The probe is the well known 1-anilinonaphthalene-8-sulfonate, which binds selectively in the native state of the protein, not the molten globule, as shown by x-ray crystallography. With femtosecond time resolution, we examined the hydration dynamics at two pHs, when the protein is physiologically in the inactive state (pH 3.6) or the active state (pH 6.7); the global structure and the binding site remain the same. The hydration correlation function, C(t), whose decay is governed by the rotational and translational motions of water molecules at the site, shows the behavior observed in this laboratory for other proteins, Subtilisin Carlsberg and Monellin, using the intrinsic amino acid tryptophan as a probe for surface hydration. However, the time scales and amplitudes vary drastically at the two pHs. For the inactive protein state, C(t) decays with an ultrafast component, close to bulk-type behavior, but 50% of the C(t) decays at a much slower rate, tau = 43 ps. In contrast, for the active state, the ultrafast component becomes dominant (90%) and the slow component changes to a faster decay, tau = 28 ps. These results indicate that in the active state water molecules in the hydration layer around the site have a high degree of mobility, whereas in the inactive state the water is more rigidly structured. For the substrate-enzyme complex, the function and dynamics at the probe site are correlated, and the relevance to the enzymatic action is clear.

摘要

我们报告了关于酶蛋白牛胰α-糜蛋白酶表面水合动力学的研究。所使用的探针是著名的1-苯胺基萘-8-磺酸盐,如X射线晶体学所示,它在蛋白质的天然状态下选择性结合,而不是在熔球状态下。我们以飞秒时间分辨率,研究了在两个pH值下的水合动力学,此时蛋白质在生理上处于无活性状态(pH 3.6)或活性状态(pH 6.7);整体结构和结合位点保持不变。水合相关函数C(t),其衰减由该位点水分子的旋转和平移运动控制,显示出在本实验室中使用内在氨基酸色氨酸作为表面水合探针时,对其他蛋白质(枯草杆菌蛋白酶卡尔伯格和莫内林)所观察到的行为。然而,在这两个pH值下,时间尺度和幅度有很大差异。对于无活性的蛋白质状态,C(t)以超快成分衰减,接近本体型行为,但50%的C(t)以慢得多的速率衰减,τ = 43皮秒。相比之下,对于活性状态,超快成分占主导(90%),慢成分变为更快的衰减,τ = 28皮秒。这些结果表明,在活性状态下,位点周围水合层中的水分子具有高度的流动性,而在无活性状态下,水的结构更刚性。对于底物-酶复合物,探针位点的功能和动力学是相关的,并且与酶促作用的相关性很明显。

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