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芽殖酵母中沉默子的功能多样性。

Functional diversity of silencers in budding yeasts.

作者信息

Sjöstrand Jimmy O O, Kegel Andreas, Aström Stefan U

机构信息

Developmental Biology, Wenner-Gren Institute, Arrhenius Laboratories E3, Stockholm University, SE-106 91 Stockholm, Sweden.

出版信息

Eukaryot Cell. 2002 Aug;1(4):548-57. doi: 10.1128/EC.1.4.548-557.2002.

DOI:10.1128/EC.1.4.548-557.2002
PMID:12456003
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC118007/
Abstract

We studied the silencing of the cryptic mating-type loci HMLa and HMRa in the budding yeast Kluyveromyces lactis. A 102-bp minimal silencer fragment was defined that was both necessary and sufficient for silencing of HMLalpha. Mutagenesis of the silencer revealed three distinct regions (A, B, and C) that were important for silencing. Recombinant K. lactis ribosomal DNA enhancer binding protein 1 (Reb1p) could bind the silencer in vitro, and point mutations in the B box abolished both Reb1p binding and silencer function. Furthermore, strains carrying temperature-sensitive alleles of the REBI gene derepressed the transcription of the HMLalpha1 gene at the nonpermissive temperature. A functional silencer element from the K. lactis cryptic HMRa locus was also identified, which contained both Reb1p binding sites and A boxes, strongly suggesting a general role for these sequences in K lactis silencing. Our data indicate that different proteins bind to Kluyveromyces silencers than to Saccharomyces silencers. We suggest that the evolution of silencers is rapid in budding yeasts and discuss the similarities and differences between silencers in Saccharomyces and Kluyveromyces.

摘要

我们研究了乳酸克鲁维酵母中隐性交配型基因座HMLa和HMRa的沉默现象。确定了一个102碱基对的最小沉默子片段,它对于HMLα的沉默既必要又充分。对沉默子进行诱变揭示了三个对沉默很重要的不同区域(A、B和C)。重组的乳酸克鲁维酵母核糖体DNA增强子结合蛋白1(Reb1p)在体外能够结合沉默子,并且B框中的点突变消除了Reb1p的结合以及沉默子功能。此外,携带REBI基因温度敏感等位基因的菌株在非允许温度下会解除对HMLα1基因转录的抑制。还鉴定出了来自乳酸克鲁维酵母隐性HMRa基因座的一个功能性沉默子元件,它同时包含Reb1p结合位点和A框,这强烈表明这些序列在乳酸克鲁维酵母的沉默中具有普遍作用。我们的数据表明,与酿酒酵母的沉默子相比,不同的蛋白质与乳酸克鲁维酵母的沉默子结合。我们认为,出芽酵母中沉默子的进化很快,并讨论了酿酒酵母和乳酸克鲁维酵母中沉默子之间的异同。

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本文引用的文献

1
Genomic exploration of the hemiascomycetous yeasts: 21. Comparative functional classification of genes.半子囊菌酵母的基因组探索:21. 基因的比较功能分类
FEBS Lett. 2000 Dec 22;487(1):134-49. doi: 10.1016/s0014-5793(00)02292-4.
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Kluyveromyces lactis Sir2p regulates cation sensitivity and maintains a specialized chromatin structure at the cryptic alpha-locus.乳酸克鲁维酵母Sir2p调节阳离子敏感性并在隐蔽的α位点维持一种特殊的染色质结构。
Genetics. 2000 Sep;156(1):81-91. doi: 10.1093/genetics/156.1.81.
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A phylogenetically conserved NAD+-dependent protein deacetylase activity in the Sir2 protein family.Sir2蛋白家族中一种系统发育保守的NAD⁺依赖性蛋白脱乙酰酶活性。
Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6658-63. doi: 10.1073/pnas.97.12.6658.
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The silencing protein SIR2 and its homologs are NAD-dependent protein deacetylases.沉默蛋白SIR2及其同源物是依赖烟酰胺腺嘌呤二核苷酸的蛋白质脱乙酰酶。
Proc Natl Acad Sci U S A. 2000 May 23;97(11):5807-11. doi: 10.1073/pnas.110148297.
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Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase.转录沉默与长寿蛋白Sir2是一种依赖烟酰胺腺嘌呤二核苷酸的组蛋白脱乙酰酶。
Nature. 2000 Feb 17;403(6771):795-800. doi: 10.1038/35001622.
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Localization and properties of a silencing element near the mat3-M mating-type cassette of Schizosaccharomyces pombe.粟酒裂殖酵母mat3-M交配型盒附近沉默元件的定位与特性
Genetics. 1999 Mar;151(3):945-63. doi: 10.1093/genetics/151.3.945.
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Mechanisms of silencing in Saccharomyces cerevisiae.酿酒酵母中的沉默机制。
Curr Opin Genet Dev. 1998 Apr;8(2):233-9. doi: 10.1016/s0959-437x(98)80146-9.
10
Theme and variation among silencing proteins in Saccharomyces cerevisiae and Kluyveromyces lactis.酿酒酵母和乳酸克鲁维酵母中沉默蛋白的主题与变异
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