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The phylogenetic distribution of bacterial ribonucleases.细菌核糖核酸酶的系统发育分布。
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本文引用的文献

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tRNA maturation in Aquifex aeolicus.嗜热栖热菌中的转运核糖核酸成熟过程
Biochimie. 2002 Aug;84(8):713-22. doi: 10.1016/s0300-9084(02)01447-5.
2
Bacillus subtilis YhaM, a member of a new family of 3'-to-5' exonucleases in gram-positive bacteria.枯草芽孢杆菌YhaM,革兰氏阳性菌中一个新的3'至5'核酸外切酶家族的成员。
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mRNA decay in Escherichia coli comes of age.大肠杆菌中的信使核糖核酸衰变已趋成熟。
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Assigning a function to a conserved group of proteins: the tRNA 3'-processing enzymes.赋予一组保守蛋白质功能:tRNA 3'加工酶。
EMBO J. 2002 Jun 3;21(11):2769-77. doi: 10.1093/emboj/21.11.2769.
5
Archaeal RNase P has multiple protein subunits homologous to eukaryotic nuclear RNase P proteins.古细菌核糖核酸酶P具有多个与真核细胞核核糖核酸酶P蛋白同源的蛋白质亚基。
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Initiation of tRNA maturation by RNase E is essential for cell viability in E. coli.核糖核酸酶E启动tRNA成熟对于大肠杆菌的细胞生存能力至关重要。
Genes Dev. 2002 May 1;16(9):1102-15. doi: 10.1101/gad.983502.
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Ribonuclease M5 has few, if any, mRNA substrates in Bacillus subtilis.核糖核酸酶M5在枯草芽孢杆菌中几乎没有(如果有的话)mRNA底物。
J Bacteriol. 2002 May;184(10):2845-9. doi: 10.1128/JB.184.10.2845-2849.2002.
8
Purification and characterization of the Escherichia coli exoribonuclease RNase R. Comparison with RNase II.大肠杆菌外切核糖核酸酶RNase R的纯化与特性分析。与RNase II的比较。
J Biol Chem. 2002 Jun 14;277(24):21624-9. doi: 10.1074/jbc.M202942200. Epub 2002 Apr 10.
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Endonuclease cleavage of messenger RNA in Bacillus subtilis.枯草芽孢杆菌中信使核糖核酸的核酸内切酶切割
Mol Microbiol. 2002 Mar;43(5):1319-29. doi: 10.1046/j.1365-2958.2002.02830.x.
10
RNase E plays an essential role in the maturation of Escherichia coli tRNA precursors.核糖核酸酶E在大肠杆菌转运RNA前体的成熟过程中发挥着重要作用。
RNA. 2002 Jan;8(1):97-109. doi: 10.1017/s1355838202014929.

细菌核糖核酸酶的系统发育分布。

The phylogenetic distribution of bacterial ribonucleases.

作者信息

Condon Ciarán, Putzer Harald

机构信息

Institut de Biologie Physico-Chimique, UPR 9073, 13 rue Pierre et Marie Curie, 75005 Paris, France.

出版信息

Nucleic Acids Res. 2002 Dec 15;30(24):5339-46. doi: 10.1093/nar/gkf691.

DOI:10.1093/nar/gkf691
PMID:12490701
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC140075/
Abstract

Ribonucleases play key, often essential, roles in cellular metabolism. Nineteen ribonuclease activities, from 22 different proteins, have so far been described in bacteria, the majority of them from either Escherichia coli or Bacillus subtilis. Here we examine the phylogenetic distribution of all of these ribonucleases in 50 eubacterial and archaeal species whose genomes have been completely sequenced, with particular emphasis on the endoribonucleases. Although some enzymes are very highly conserved throughout evolution, there appears to be no truly universal ribonuclease. While some organisms, like E.coli, have a large selection of ribonucleases, many with overlapping functions, others seem to have relatively few or have many that remain to be discovered.

摘要

核糖核酸酶在细胞代谢中发挥着关键作用,且往往不可或缺。迄今为止,已在细菌中描述了来自22种不同蛋白质的19种核糖核酸酶活性,其中大多数来自大肠杆菌或枯草芽孢杆菌。在此,我们研究了所有这些核糖核酸酶在50种基因组已完全测序的真细菌和古细菌物种中的系统发育分布,尤其着重于内切核糖核酸酶。尽管有些酶在整个进化过程中高度保守,但似乎不存在真正普遍存在的核糖核酸酶。一些生物体,如大肠杆菌,有大量可供选择的核糖核酸酶,其中许多功能重叠,而其他生物体似乎核糖核酸酶相对较少,或者有许多仍有待发现。