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Structural and Functional Characterization of Programmed Ribosomal Frameshift Signals in West Nile Virus Strains Reveals High Structural Plasticity Among cis-Acting RNA Elements.西尼罗河病毒株中程序性核糖体移码信号的结构与功能表征揭示了顺式作用RNA元件间的高度结构可塑性。
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本文引用的文献

1
Structure and function of the stimulatory RNAs involved in programmed eukaryotic-1 ribosomal frameshifting.参与真核生物程序性-1核糖体移码的刺激性RNA的结构与功能。
Cold Spring Harb Symp Quant Biol. 2001;66:233-48. doi: 10.1101/sqb.2001.66.233.
2
Overriding standard decoding: implications of recoding for ribosome function and enrichment of gene expression.超越标准解码:重新编码对核糖体功能和基因表达富集的影响。
Cold Spring Harb Symp Quant Biol. 2001;66:217-32. doi: 10.1101/sqb.2001.66.217.
3
A -1 ribosomal frameshift element that requires base pairing across four kilobases suggests a mechanism of regulating ribosome and replicase traffic on a viral RNA.一个需要跨越4千碱基进行碱基配对的 -1核糖体移码元件提示了一种在病毒RNA上调节核糖体和复制酶移动的机制。
Proc Natl Acad Sci U S A. 2002 Aug 20;99(17):11133-8. doi: 10.1073/pnas.162223099. Epub 2002 Jul 30.
4
Competition between SsrA tagging and translational termination at weak stop codons in Escherichia coli.大肠杆菌中SsrA标签与弱终止密码子处翻译终止之间的竞争
Mol Microbiol. 2002 Aug;45(3):745-54. doi: 10.1046/j.1365-2958.2002.03045.x.
5
Bacterial SsrA system plays a role in coping with unwanted translational readthrough caused by suppressor tRNAs.细菌SsrA系统在应对由抑制性tRNA引起的不必要的翻译通读方面发挥作用。
Genes Cells. 2002 May;7(5):509-19. doi: 10.1046/j.1365-2443.2002.00537.x.
6
A new UAG-encoded residue in the structure of a methanogen methyltransferase.产甲烷菌甲基转移酶结构中的一个新的UAG编码残基。
Science. 2002 May 24;296(5572):1462-6. doi: 10.1126/science.1069556.
7
Pyrrolysine encoded by UAG in Archaea: charging of a UAG-decoding specialized tRNA.古菌中由UAG编码的吡咯赖氨酸:对解码UAG的特殊tRNA进行氨酰化
Science. 2002 May 24;296(5572):1459-62. doi: 10.1126/science.1069588.
8
Biochemistry. The 22nd amino acid.生物化学。第22种氨基酸。
Science. 2002 May 24;296(5572):1409-10. doi: 10.1126/science.1073339.
9
Ribosome structure: revisiting the connection between translational accuracy and unconventional decoding.核糖体结构:重新审视翻译准确性与非常规解码之间的联系。
Trends Biochem Sci. 2002 Apr;27(4):178-83. doi: 10.1016/s0968-0004(02)02064-9.
10
Recoding: translational bifurcations in gene expression.重新编码:基因表达中的翻译分岔
Gene. 2002 Mar 20;286(2):187-201. doi: 10.1016/s0378-1119(02)00423-7.

2003年重新编码

RECODE 2003.

作者信息

Baranov Pavel V, Gurvich Olga L, Hammer Andrew W, Gesteland Raymond F, Atkins John F

机构信息

Department of Human Genetics, University of Utah, 15N 2030E Room 7410, Salt Lake City, UT 84112-5330, USA.

出版信息

Nucleic Acids Res. 2003 Jan 1;31(1):87-9. doi: 10.1093/nar/gkg024.

DOI:10.1093/nar/gkg024
PMID:12519954
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC165471/
Abstract

The RECODE database is a compilation of translational recoding events (programmed ribosomal frameshifting, codon redefinition and translational bypass). The database provides information about the genes utilizing these events for their expression, recoding sites, stimulatory sequences and other relevant information. The Database is freely available at http://recode.genetics.utah.edu/.

摘要

RECODE数据库是一个翻译重编码事件(程序性核糖体移码、密码子重新定义和翻译跳跃)的汇编。该数据库提供了利用这些事件进行表达的基因、重编码位点、刺激序列及其他相关信息。可通过http://recode.genetics.utah.edu/免费访问该数据库。