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一种使用MQ-HACACO实验对大型蛋白质主链共振进行归属的新策略。

A new strategy for backbone resonance assignment in large proteins using a MQ-HACACO experiment.

作者信息

Pervushin Konstantin, Eletsky Alexander

机构信息

Laboratorium für Physikalische Chemie, Eidgenössische Technische Hochschule Hönggerberg, CH-8093 Zurich, Switzerland.

出版信息

J Biomol NMR. 2003 Feb;25(2):147-52. doi: 10.1023/a:1022225711122.

Abstract

A new strategy of backbone resonance assignment is proposed based on a combination of the most sensitive TROSY-type triple resonance experiments such as TROSY-HNCA and TROSY-HNCO with a new 3D multiple-quantum HACACO experiment. The favourable relaxation properties of the multiple-quantum coherences and signal detection using the (13)C' antiphase coherences optimize the performance of the proposed experiment for application to larger proteins. In addition to the (1)H(N), (15)N,(13)C(alpha) and (13)C' chemical shifts the 3D multiple-quantum HACACO experiment provides assignment for the (1)H(alpha) resonances in constrast to previously proposed experiments for large proteins. The strategy is demonstrated with the 44 kDa uniformly (15)N,(13)C-labeled and fractionally 35% deuterated trimeric B. subtilis Chorismate Mutase measured at 20 degrees C and 9 degrees C. Measurements at the lower temperature indicate that the new strategy can be applied to even larger proteins with molecular weights up to 80 kDa.

摘要

基于最灵敏的TROSY型三共振实验(如TROSY-HNCA和TROSY-HNCO)与新的3D多量子HACACO实验相结合,提出了一种主链共振归属的新策略。多量子相干的良好弛豫特性以及使用(13)C'反相相干进行信号检测,优化了所提出实验在应用于更大蛋白质时的性能。除了(1)H(N)、(15)N、(13)C(α)和(13)C'化学位移外,与之前针对大蛋白质提出的实验相比,3D多量子HACACO实验还为(1)H(α)共振提供了归属。该策略通过在20℃和9℃下测量的44 kDa均匀(15)N、(13)C标记且35%部分氘代的枯草芽孢杆菌分支酸变位酶三聚体得到了验证。在较低温度下的测量表明,新策略甚至可以应用于分子量高达80 kDa的更大蛋白质。

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