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从构建的BAC文库中鉴定和表征包含抗性基因簇的甜瓜基因组区域。甜瓜与拟南芥之间的微共线性。

Identification and characterisation of a melon genomic region containing a resistance gene cluster from a constructed BAC library. Microcolinearity between Cucumis melo and Arabidopsis thaliana.

作者信息

van Leeuwen Hans, Monfort Amparo, Zhang Hong-Bin, Puigdomènech Pere

机构信息

Department de Genètica Molecular, Institut de Biologia Molecular de Barcelona, CID-CSIC, Jordi Girona 18, 08034, Barcelona, Spain.

出版信息

Plant Mol Biol. 2003 Mar;51(5):703-18. doi: 10.1023/a:1022573230486.

Abstract

A bacterial artificial chromosome (BAC) library from the dihaploid melon line 'PIT92' was constructed with a 6 times coverage of the haploid melon genome. A contig of four BACs around the MRGH63 resistance gene homologue fragment was created. The complete sequence of a 117-kb BAC clone allowed to determine two clearly defined regions, the first one containing a cluster of three resistance gene homologues. Separated by a retrotransposon, that contains large long terminal repeats, the second region presents a group of genes with a conserved distribution in two regions of the Arabidopsis genome. The detailed analysis of this region provides a description of the gene structure and the presence of repetitive sequences in a defined fragment of the genome of Cucumis melo.

摘要

构建了来自双单倍体甜瓜品系“PIT92”的细菌人工染色体(BAC)文库,其覆盖单倍体甜瓜基因组6倍。围绕MRGH63抗性基因同源片段创建了一个由四个BAC组成的重叠群。一个117 kb的BAC克隆的完整序列使得能够确定两个明确界定的区域,第一个区域包含三个抗性基因同源物的簇。第二个区域被一个含有大的长末端重复序列的逆转座子隔开,呈现出一组在拟南芥基因组的两个区域具有保守分布的基因。对该区域的详细分析描述了甜瓜基因组特定片段中的基因结构和重复序列的存在情况。

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