GoFish通过基因本体论属性组合来查找基因。

GoFish finds genes with combinations of Gene Ontology attributes.

作者信息

Berriz Gabriel F, White James V, King Oliver D, Roth Frederick P

机构信息

Harvard Medical School, Department of Biological Chemistry and Molecular Pharmacology, 250 Longwood Avenue, Boston, MA 02115, USA.

出版信息

Bioinformatics. 2003 Apr 12;19(6):788-9. doi: 10.1093/bioinformatics/btg088.

DOI:10.1093/bioinformatics/btg088

PMID:12691998

Abstract

GoFish is a Java application that allows users to search for gene products with particular gene ontology (GO) attributes, or combinations of attributes. GoFish ranks gene products by the degree to which they satisfy a Boolean query. Four organisms are currently supported: Saccaromyces cerevisiae, Caenorhabditis elegans, Drosophila melanogaster, and M.musculus.

摘要

GoFish是一个Java应用程序，它允许用户搜索具有特定基因本体（GO）属性或属性组合的基因产物。GoFish根据基因产物满足布尔查询的程度对其进行排名。目前支持四种生物：酿酒酵母、秀丽隐杆线虫、黑腹果蝇和小家鼠。