Wormleaton Sally, Kuzio John, Winstanley Doreen
Horticulture Research International, Wellesbourne, Warwick CV35 9EF, UK.
Virology. 2003 Jul 5;311(2):350-65. doi: 10.1016/s0042-6822(03)00149-1.
The nucleotide sequence of the Adoxophyes orana granulovirus (AdorGV) DNA genome was determined and analysed. The genome contains 99,657 bp and has an A + T content of 65.5%. The analysis predicted 119 ORFs of 150 nucleotides or larger that showed minimal overlap. Of these putative genes, 104 (87%) were homologous to genes identified previously in other baculoviruses. The mean overall amino acid identity of AdorGV ORFs was highest with CpGV ORFs at 48%. Sixty-three ORFs were conserved among all lepidopteran baculoviruses and are considered to be common baculoviral genes. Several genes reported to have major roles in baculovirus biology were not found in the AdorGV genome. These included chitinase and cathepsin, which are involved in the liquefaction of the host, which explains why AdorGV-infected insects do not degrade in a typical manner. The AdorGV genome encoded two inhibitor of apoptosis (iap) genes iap-3 and iap-5. Among all of the granuloviruses genomes there was a very high level of gene collinearity. The genes shared by AdorGV and CpGV had exactly the same order along the genome with the exception of one gene, iap-3. The AdorGV genome did not contain typical homologous region (hr) sequences. However, it contained nine repetitive regions in the genome.
测定并分析了苹果蠹蛾颗粒体病毒(AdorGV)DNA基因组的核苷酸序列。该基因组包含99,657个碱基对,A + T含量为65.5%。分析预测有119个开放阅读框(ORF)长度为150个核苷酸或更长,且重叠极少。在这些推定基因中,104个(87%)与先前在其他杆状病毒中鉴定出的基因同源。AdorGV开放阅读框的平均总体氨基酸同一性与苹果蠹蛾颗粒体病毒(CpGV)的开放阅读框最高,为48%。63个开放阅读框在所有鳞翅目杆状病毒中保守,被认为是常见的杆状病毒基因。在AdorGV基因组中未发现一些据报道在杆状病毒生物学中起主要作用的基因。这些基因包括参与宿主液化的几丁质酶和组织蛋白酶,这解释了为什么受AdorGV感染的昆虫不会以典型方式降解。AdorGV基因组编码两个凋亡抑制因子(iap)基因iap - 3和iap - 5。在所有颗粒体病毒基因组中,基因共线性水平非常高。AdorGV和CpGV共有的基因在基因组上具有完全相同的顺序,只有一个基因iap - 3除外。AdorGV基因组不包含典型的同源区域(hr)序列。然而,它在基因组中包含九个重复区域。