Ardisson-Araújo Daniel M P, Pereira Bruna T, Melo Fernando L, Ribeiro Bergmann M, Báo Sônia N, de A Zanotto Paolo M, Moscardi Flávio, Kitajima Elliot W, Sosa-Gomez Daniel R, Wolff José L C
Departamento de Biologia Celular, Instituto de Ciências Biológicas, Universidade de Brasília, Brasília, DF, Brazil.
Programa de Pós-graduação Interunidades em Biotecnologia, Instituto de Ciências Biomédicas (ICB), Universidade de São Paulo (USP), São Paulo, São Paulo, Brazil.
BMC Genomics. 2016 Feb 4;17:94. doi: 10.1186/s12864-016-2408-9.
A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil.
The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7% encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses.
DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far.
一种β-杆状病毒(DisaGV)从蔗蛀茎夜蛾(鳞翅目:草螟科)中分离得到,蔗蛀茎夜蛾是巴西甘蔗及其他单子叶作物最重要的害虫之一。
采用454焦磷酸测序法测定了DisaGV的全基因组序列。该基因组长度为98,392 bp,是迄今为止测序的感染鳞翅目的杆状病毒中最小的。其G + C含量为29.7%,编码125个推定的开放阅读框(ORF)。发现了所有37个杆状病毒核心基因以及一组19个β-杆状病毒特异性基因。一组13个推定基因在迄今为止测序的任何其他杆状病毒基因组中均未发现。系统发育分析表明,DisaGV是β-杆状病毒属的成员,并且是由ChocGV、ErelGV、PiraGV分离株、ClanGV、CaLGV、CpGV、CrleGV、AdorGV、PhopGV和EpapGV形成的一个聚类的姐妹群。令人惊讶的是,我们在DisaGV基因组中发现了一个与鳞翅目及其他昆虫病毒基因相关的G蛋白偶联受体和一个gp64同源物,其可能是从第1组α-杆状病毒水平基因转移的产物。
DisaGV代表β-杆状病毒属的一个独特谱系。它与CpGV相关类群密切相关,且目前呈现出最小的基因组。值得注意的是,我们发现了gp64的一个同源物,迄今为止仅在第1组α-杆状病毒基因组中报道过。