Yi Hana, Chang Young-Hyo, Oh Hyun Woo, Bae Kyung Sook, Chun Jongsik
School of Biological Sciences, Seoul National University, 56-1 Shillim-dong, Kwanak-gu, Seoul 151-742, Republic of Korea.
Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology, Yusung PO Box 115, Taejon 305-600, Republic of Korea.
Int J Syst Evol Microbiol. 2003 Jul;53(Pt 4):1013-1018. doi: 10.1099/ijs.0.02521-0.
Two red pigment-producing bacterial strains with a metallic green sheen were isolated from a sediment sample of getbol, the Korean tidal flat. Phylogenetic analysis based on 16S rDNA sequences showed that these isolates represent a phyletic lineage within the gamma-Proteobacteria that is distantly related to the genus Hahella. No bacterial species with validly published names showed > or = 92% 16S rRNA similarity with the getbol isolates. The strains were gram-negative, chemo-organotrophic, aerobic and required NaCl (1-7%) for growth. They produced pigments with maximum absorption at 540 nm, which indicated the presence of prodigiosin, a well-known red pigment previously detected in Serratia marcescens. The major isoprenoid quinone was ubiquinone-9. The predominant cellular fatty acids were saturated and monounsaturated straight-chain fatty acids. The DNA G + C contents ranged from 40 to 42 mol%. The combination of physiological, biochemical and chemotaxonomic data clearly separated the test strains from other phylogenetically related genera in the gamma-Proteobacteria. On the basis of polyphasic evidence from this study, it is proposed that the two getbol isolates should be classified in a novel genus, Zooshikella gen. nov., as Zooshikella ganghwensis sp. nov.
从韩国潮间带滩涂沉积物样本中分离出两株具有金属绿色光泽的产红色色素细菌菌株。基于16S rDNA序列的系统发育分析表明,这些分离株代表γ-变形菌纲内的一个系统发育谱系,与海氏菌属亲缘关系较远。没有已有效发表名称的细菌物种与滩涂分离株的16S rRNA相似度≥92%。这些菌株为革兰氏阴性、化能有机营养型、需氧菌,生长需要NaCl(1-7%)。它们产生的色素在540 nm处有最大吸收峰,这表明存在灵菌红素,一种先前在粘质沙雷氏菌中检测到的著名红色色素。主要的类异戊二烯醌为泛醌-9。主要的细胞脂肪酸为饱和和单不饱和直链脂肪酸。DNA G + C含量范围为40至42 mol%。生理、生化和化学分类学数据的组合清楚地将测试菌株与γ-变形菌纲中其他系统发育相关的属区分开来。基于本研究的多相证据,建议将这两株滩涂分离株归为一个新属,即佐氏菌属(Zooshikella gen. nov.),命名为江华佐氏菌(Zooshikella ganghwensis sp. nov.)。