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胡萝卜线粒体中的细胞色素氧化酶亚基II基因含有两个内含子。

The coxII gene in carrot mitochondria contains two introns.

作者信息

Lippok B, Brennicke A, Wissinger B

机构信息

Institut für Genbiologische Forschung, Berlin, FRG.

出版信息

Mol Gen Genet. 1992 Mar;232(2):322-7. doi: 10.1007/BF00280012.

DOI:10.1007/BF00280012
PMID:1372953
Abstract

The gene for cytochrome oxidase subunit II (coxII) in carrot is encoded by a unique locus in the mitochondrial genome. In contrast to the coxII genes in the numerous other plant species investigated to date, the coding region is interrupted by two group II introns. The carrot 5' intron is the homologue of the single intervening sequence found in several monocot and dicot coxII genes. Sequences similar to the 3' intron of the carrot coxII gene have not been reported previously and are not detectable by hybridization with Oenothera mtDNA. Northern hybridizations indicate complex precursor transcript patterns with mRNA molecules up to 10 kb length. The excised intron sequences appear to be stably maintained in the mRNA pool. Amino acid sequence comparisons suggest that the carrot coxII mRNA needs to be edited by numerous C to U transitions.

摘要

胡萝卜细胞色素氧化酶亚基II(coxII)基因由线粒体基因组中的一个独特位点编码。与迄今为止研究的许多其他植物物种中的coxII基因不同,其编码区被两个II类内含子打断。胡萝卜的5'内含子是在几个单子叶和双子叶植物coxII基因中发现的单个居间序列的同源物。与胡萝卜coxII基因3'内含子相似的序列以前尚未见报道,用月见草线粒体DNA杂交也检测不到。Northern杂交显示出复杂的前体转录本模式,mRNA分子长度可达10 kb。切除的内含子序列似乎稳定地保留在mRNA库中。氨基酸序列比较表明,胡萝卜coxII mRNA需要通过大量的C到U转换进行编辑。

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1
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引用本文的文献

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Theor Appl Genet. 1995 Jul;91(1):150-9. doi: 10.1007/BF00220872.
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本文引用的文献

1
Cytochrome Oxidase Subunit II Gene from Carrot Contains an Intron.从胡萝卜中克隆的细胞色素氧化酶亚基 II 基因含有内含子。
Plant Physiol. 1987 Aug;84(4):1074-9. doi: 10.1104/pp.84.4.1074.
2
The wheat cytochrome oxidase subunit II gene has an intron insert and three radical amino acid changes relative to maize.小麦细胞色素氧化酶亚基 II 基因有一个内含子插入和三个相对于玉米的自由基氨基酸变化。
EMBO J. 1984 Nov;3(11):2531-6. doi: 10.1002/j.1460-2075.1984.tb02168.x.
3
Cytochrome oxidase subunit II gene in mitochondria of Oenothera has no intron.线粒体细胞色素氧化酶亚基 II 基因在月见草中没有内含子。
无色藻类威克汉姆原囊藻中的线粒体基因,其外显子类似植物基因,但其内含子类似真菌基因。
Nucleic Acids Res. 1993 Feb 11;21(3):719-26. doi: 10.1093/nar/21.3.719.
EMBO J. 1983;2(12):2173-8. doi: 10.1002/j.1460-2075.1983.tb01719.x.
4
Conservation of RNA secondary structures in two intron families including mitochondrial-, chloroplast- and nuclear-encoded members.两个内含子家族中RNA二级结构的保守性,包括线粒体、叶绿体和核编码成员。
EMBO J. 1983;2(1):33-8. doi: 10.1002/j.1460-2075.1983.tb01376.x.
5
The Zea mays mitochondrial gene coding cytochrome oxidase subunit II has an intervening sequence and does not contain TGA codons.玉米线粒体中编码细胞色素氧化酶亚基II的基因含有一个间隔序列,且不包含TGA密码子。
Cell. 1981 Nov;26(3 Pt 1):315-23. doi: 10.1016/0092-8674(81)90200-2.
6
Cytochrome oxidase subunit II gene of rice has an insertion sequence within the intron.水稻细胞色素氧化酶亚基II基因在内含子中有一个插入序列。
Nucleic Acids Res. 1984 Oct 11;12(19):7305-15. doi: 10.1093/nar/12.19.7305.
7
Animal mitochondrial DNA: an extreme example of genetic economy.动物线粒体DNA:基因精简的极端例子。
Int Rev Cytol. 1985;93:93-145. doi: 10.1016/s0074-7696(08)61373-x.
8
Unidirectional digestion with exonuclease III in DNA sequence analysis.DNA序列分析中用核酸外切酶III进行单向消化。
Methods Enzymol. 1987;155:156-65. doi: 10.1016/0076-6879(87)55014-5.
9
The NADH-dehydrogenase subunit 5 gene in Oenothera mitochondria contains two introns and is co-transcribed with the 5 S rRNA gene.月见草属线粒体中的NADH脱氢酶亚基5基因含有两个内含子,并与5S rRNA基因共同转录。
Mol Gen Genet. 1988 Apr;212(1):56-65. doi: 10.1007/BF00322444.
10
Pea cytochrome oxidase subunit II gene has no intron and generates two mRNA transcripts with different 5'-termini.豌豆细胞色素氧化酶亚基II基因没有内含子,并产生两种具有不同5'末端的mRNA转录本。
Nucleic Acids Res. 1985 May 10;13(9):3195-212. doi: 10.1093/nar/13.9.3195.