Karamysheva Zemfira N, Karamyshev Andrey L, Ito Koichi, Yokogawa Takashi, Nishikawa Kazuya, Nakamura Yoshikazu, Matsufuji Senya
Department of Biochemistry II, The Jikei University, School of Medicine, 3-25-8 Nishi-shinbashi, Minato-ku, Tokyo 105-8461, Japan.
Nucleic Acids Res. 2003 Oct 15;31(20):5949-56. doi: 10.1093/nar/gkg789.
Translation termination in eukaryotes is mediated by the release factors eRF1 and eRF3, but mechanisms of the interplay between these factors are not fully understood, due partly to the difficulty of measuring termination on eukaryotic mRNAs. Here, we describe an in vitro system for the assay of termination using competition with programmed frameshifting at the recoding signal of mammalian antizyme. The efficiency of antizyme frameshifting in rabbit reticulocyte lysates was reduced by addition of recombinant rabbit eRF1 and eRF3 in a synergistic manner. Addition of suppressor tRNA to this assay system revealed competition with a third event, stop codon readthrough. Using these assays, we demonstrated that an eRF3 mutation at the GTPase domain repressed termination in a dominant negative fashion probably by binding to eRF1. The effect of the release factors and the suppressor tRNA showed that the stop codon at the antizyme frameshift site is relatively inefficient compared to either the natural termination signals at the end of protein coding sequences or the readthrough signal from a plant virus. The system affords a convenient assay for release factor activity and has provided some novel views of the mechanism of antizyme frameshifting.
真核生物中的翻译终止由释放因子eRF1和eRF3介导,但这些因子之间相互作用的机制尚未完全明确,部分原因是难以测定真核生物mRNA上的终止情况。在此,我们描述了一种体外系统,用于通过与哺乳动物抗酶重编码信号处的程序性移码竞争来测定终止。在兔网织红细胞裂解物中加入重组兔eRF1和eRF3,以协同方式降低了抗酶移码的效率。向该测定系统中加入抑制性tRNA,揭示了与第三个事件——终止密码子通读的竞争。使用这些测定方法,我们证明了GTPase结构域处的eRF3突变可能通过与eRF1结合,以显性负性方式抑制终止。释放因子和抑制性tRNA的作用表明,与蛋白质编码序列末端的天然终止信号或植物病毒的通读信号相比,抗酶移码位点处的终止密码子效率相对较低。该系统为释放因子活性提供了一种便捷的测定方法,并对抗酶移码机制提供了一些新的见解。