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Eval:一个用于分析基因组注释的软件包。

Eval: a software package for analysis of genome annotations.

作者信息

Keibler Evan, Brent Michael R

机构信息

Department of Computer Science and Engineering, Washington University, St, Louis, MO 63130, USA.

出版信息

BMC Bioinformatics. 2003 Oct 17;4:50. doi: 10.1186/1471-2105-4-50.

Abstract

SUMMARY

Eval is a flexible tool for analyzing the performance of gene annotation systems. It provides summaries and graphical distributions for many descriptive statistics about any set of annotations, regardless of their source. It also compares sets of predictions to standard annotations and to one another. Input is in the standard Gene Transfer Format (GTF). Eval can be run interactively or via the command line, in which case output options include easily parsable tab-delimited files.

AVAILABILITY

To obtain the module package with documentation, go to http://genes.cse.wustl.edu/ and follow links for Resources, then Software. Please contact brent@cse.wustl.edu

摘要

摘要

Eval是一个用于分析基因注释系统性能的灵活工具。它可为任何注释集的许多描述性统计提供总结和图形分布,无论这些注释的来源如何。它还能将预测集与标准注释以及相互之间进行比较。输入采用标准基因转移格式(GTF)。Eval可以交互式运行,也可通过命令行运行,在命令行运行的情况下,输出选项包括易于解析的制表符分隔文件。

可用性

要获取带有文档的模块包,请访问http://genes.cse.wustl.edu/,并按照资源、软件的链接进行操作。请联系brent@cse.wustl.edu

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad4b/270064/3f69efaee8f8/1471-2105-4-50-1.jpg

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