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产物同位素效应如何证明细胞色素P450催化的C-H羟基化反应中双态“反弹”机制的运作?

How does product isotope effect prove the operation of a two-state "rebound" mechanism in C-H hydroxylation by cytochrome P450?

作者信息

Kumar Devesh, de Visser Samuël P, Shaik Sason

机构信息

Department of Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel.

出版信息

J Am Chem Soc. 2003 Oct 29;125(43):13024-5. doi: 10.1021/ja036906x.

DOI:10.1021/ja036906x
PMID:14570465
Abstract

C-H hydroxylation is a fundamental process. In Nature it is catalyzed by the enzyme cytochrome P450, in a still-debated mechanism that poses a major intellectual challenge for both experiment and theory; currently, the opinions keep swaying between the original single-state rebound mechanism, a two-oxidant mechanism (where ferric peroxide participates as a second oxidant, in addition to the primary active species, the high-valent iron-oxo species), and two-state reactivity (TSR) mechanism (where two spin states are involved). Recent product isotope effect (PIE) measurements for the trans-2-phenyl-methyl cyclopropane probe (1), led Newcomb and co-workers (Newcomb, M.; Aebisher, D.; Shen, R.; Esala, R.; Chandrasena, P.; Hollenberg, P.; Coon, M. J. J. Am. Chem. Soc. 2003, 125, 6064-6065) to rule out TSR in favor of the two-oxidant scenario, since the direction of the PIE was at odds with the one predicted from calculations on methane hydroxylation. The present report describes a density functional theoretical study of C-H hydroxylation of the Newcomb probe, 1, leading to rearranged (3) and unrearranged (2) products. Our study shows that the reaction occurs via TSR in which the high-spin pathway gives dominant rearranged products, whereas the low-spin pathway favors unrearranged products. The calculated PIE(2/3) values based on TSR are found to be in excellent agreement with the experimental data of Newcomb and co-workers. This match between experiment and theory makes a strong case that the reaction occurs via TSR mechanism.

摘要

C-H羟化是一个基本过程。在自然界中,它由细胞色素P450酶催化,其机制仍存在争议,这对实验和理论都构成了重大的智力挑战;目前,观点在原始的单态反弹机制、双氧化剂机制(除了主要活性物种高价铁氧物种外,过氧化铁作为第二种氧化剂参与)和双态反应性(TSR)机制(涉及两种自旋态)之间摇摆不定。最近对反式-2-苯基甲基环丙烷探针(1)的产物同位素效应(PIE)测量,使得纽科姆及其同事(纽科姆,M.;艾比舍尔,D.;沈,R.;埃萨拉,R.;钱德拉塞纳,P.;霍伦贝格,P.;库恩,M. J. 《美国化学会志》2003年,125卷,6064 - 6065页)排除了TSR,支持双氧化剂情形,因为PIE的方向与甲烷羟化计算预测的方向不一致。本报告描述了对纽科姆探针1的C-H羟化的密度泛函理论研究,该反应生成重排产物(3)和未重排产物(2)。我们的研究表明,该反应通过TSR发生,其中高自旋途径产生主要的重排产物,而低自旋途径有利于未重排产物。基于TSR计算的PIE(2/3)值与纽科姆及其同事的实验数据非常吻合。实验与理论的这种匹配有力地证明了该反应是通过TSR机制发生的。

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