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基于多重投影的n维核磁共振谱广义重建:应用于蛋白G B1结构域的5维HACACONH谱

Generalized reconstruction of n-D NMR spectra from multiple projections: application to the 5-D HACACONH spectrum of protein G B1 domain.

作者信息

Coggins Brian E, Venters Ronald A, Zhou Pei

机构信息

Department of Biochemistry and Duke University NMR Center, Duke University Medical Center, Durham, North Carolina 27710, USA.

出版信息

J Am Chem Soc. 2004 Feb 4;126(4):1000-1. doi: 10.1021/ja039430q.

Abstract

Reconstructing multidimensional NMR spectra from 2-D projections significantly reduces the time needed for data collection over conventional methodology. Here, we provide a generalization of the projection-reconstruction process to spectra of arbitrary dimensionality, using a concept of coordinate rotation to produce explicit expressions for reconstruction. These expressions allow one to reconstruct subsets of the higher dimensionality space without producing the full spectrum, permitting convenient analysis of the data. We demonstrate the effectiveness of these procedures in the reconstruction of the 5-D HACACONH spectrum of protein G B1 domain from 12 2-D projections collected in five experiments. We further demonstrate that the base spectra of GFT-NMR are equivalent to projections of the 5-D spectrum at fixed angles.

摘要

从二维投影重建多维核磁共振谱,相较于传统方法,显著减少了数据采集所需的时间。在此,我们将投影重建过程推广到任意维度的谱,利用坐标旋转的概念来生成重建的显式表达式。这些表达式使人们能够重建高维空间的子集而无需生成完整谱,便于对数据进行分析。我们通过在五个实验中收集的12个二维投影,证明了这些方法在重建蛋白质G B1结构域的五维HACACONH谱方面的有效性。我们进一步证明,GFT-NMR的基础谱等同于五维谱在固定角度下的投影。

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