Strug Lisa, Sun Lei, Corey Mary
University of Toronto, Public Health Sciences, 12 Queen's Park Crescent West, Toronto, Ontario, Canada.
BMC Genet. 2003 Dec 31;4 Suppl 1(Suppl 1):S14. doi: 10.1186/1471-2156-4-S1-S14.
There has been a lack of consistency in detecting chromosomal loci that are linked to obesity-related traits. This may be due, in part, to the phenotype definition. Many studies use a one-time, single measurement as a phenotype while one's weight often fluctuates considerably throughout adulthood. Longitudinal data from the Framingham Heart Study were used to derive alternative phenotypes that may lead to more consistent findings. Body mass index (BMI), a measurement for obesity, is known to increase with age and then plateau or decline slightly; the decline phase may represent a threshold or survivor effect. We propose to use the weight gain phase of BMI to derive phenotypes useful for linkage analysis of obesity. Two phenotypes considered in the present study are the average of and the slope of the BMI measurements in the gain phase (gain mean and gain slope). For comparison, we also considered the average of all BMI measurements available (overall mean). Linkage analysis using the gain mean phenotype exhibited two markers with LOD scores greater than 3, with the largest score of 3.52 on chromosome 4 at ATA2A03. In contrast, no LOD scores greater than 3 were observed when overall mean was used. The gain slope produced weak evidence for linkage on chromosome 4 with a multipoint LOD score of 1.77 at GATA8A05. Our analysis shows how omitting the decline phase of BMI in the definition of obesity phenotypes can result in evidence for linkage which might have been otherwise overlooked.
在检测与肥胖相关性状连锁的染色体位点方面,一直缺乏一致性。这可能部分归因于表型定义。许多研究将一次性的单一测量作为表型,而一个人的体重在成年期往往会有相当大的波动。弗雷明汉心脏研究的纵向数据被用于推导可能会得出更一致结果的替代表型。体重指数(BMI)是一种衡量肥胖的指标,已知它会随着年龄增长而增加,然后趋于平稳或略有下降;下降阶段可能代表一种阈值或幸存者效应。我们建议利用BMI的体重增加阶段来推导对肥胖连锁分析有用的表型。本研究中考虑的两种表型是体重增加阶段BMI测量值的平均值和斜率(增加均值和增加斜率)。为作比较,我们还考虑了所有可用BMI测量值的平均值(总体均值)。使用增加均值表型进行连锁分析时,发现有两个标记的LOD分数大于3,在4号染色体上ATA2A03处的最大分数为3.52。相比之下,使用总体均值时未观察到LOD分数大于3的情况。增加斜率在4号染色体上产生了微弱的连锁证据,在GATA8A05处的多点LOD分数为1.77。我们的分析表明,在肥胖表型定义中忽略BMI的下降阶段如何会导致可能被忽视的连锁证据。