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细胞信号网络建模

Modeling cell signaling networks.

作者信息

Eungdamrong Narat J, Iyengar Ravi

机构信息

Department of Pharmacology and Biological Chemistry, Mount Sinai School of Medicine, New York, NY 10029, USA.

出版信息

Biol Cell. 2004 Jun;96(5):355-62. doi: 10.1016/j.biolcel.2004.03.004.

Abstract

Cell signaling pathways interact with one another to form networks in mammalian systems. Such networks are complex in their organization and exhibit emergent properties such as bistability and ultrasensitivity. Analysis of signaling networks requires a combination of experimental and theoretical approaches including the development and analysis of models. This review focuses on theoretical approaches to understanding cell signaling networks. Using heterotrimeric G protein pathways an example, we demonstrate how interactions between two pathways can result in a network that contains a positive feedback loop and function as a switch. Different mathematical approaches that are currently used to model signaling networks are described, and future challenges including the need for databases as well as enhanced computing environments are discussed.

摘要

在哺乳动物系统中,细胞信号通路相互作用形成网络。此类网络结构复杂,具有双稳态和超敏感性等涌现特性。信号网络分析需要结合实验和理论方法,包括模型的开发与分析。本综述聚焦于理解细胞信号网络的理论方法。以异源三聚体G蛋白通路为例,我们展示了两条通路之间的相互作用如何导致一个包含正反馈回路并起开关作用的网络。描述了当前用于信号网络建模的不同数学方法,并讨论了未来的挑战,包括对数据库的需求以及增强的计算环境。

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