• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过系统生物学利用生物复杂性进行菌株改良。

Exploiting biological complexity for strain improvement through systems biology.

作者信息

Stephanopoulos Gregory, Alper Hal, Moxley Joel

机构信息

Department of Chemical Engineering, Massachusetts Institute of Technology, Room 56-469, Cambridge, MA 02139, USA.

出版信息

Nat Biotechnol. 2004 Oct;22(10):1261-7. doi: 10.1038/nbt1016.

DOI:10.1038/nbt1016
PMID:15470466
Abstract

Cellular complexity makes it difficult to build a complete understanding of cellular function but also offers innumerable possibilities for modifying the cellular machinery to achieve a specific purpose. The exploitation of cellular complexity for strain improvement has been a challenging goal for applied biological research because it requires the coordinated understanding of multiple cellular processes. It is therefore pursued most efficiently in the framework of systems biology. Progress in strain improvement will depend not only on advances in technologies for high-throughput measurements but, more importantly, on the development of theoretical methods that increase the information content of these measurements and, as such, facilitate the elucidation of mechanisms and the identification of genetic targets for modification.

摘要

细胞的复杂性使得全面理解细胞功能变得困难,但也为改造细胞机制以实现特定目的提供了无数可能性。利用细胞复杂性来改进菌株一直是应用生物学研究的一个具有挑战性的目标,因为这需要对多个细胞过程进行协同理解。因此,在系统生物学的框架内能够最有效地实现这一目标。菌株改良的进展不仅将取决于高通量测量技术的进步,更重要的是,取决于理论方法的发展,这些方法能够增加这些测量的信息含量,从而有助于阐明机制并识别用于改造的遗传靶点。

相似文献

1
Exploiting biological complexity for strain improvement through systems biology.通过系统生物学利用生物复杂性进行菌株改良。
Nat Biotechnol. 2004 Oct;22(10):1261-7. doi: 10.1038/nbt1016.
2
Toward computational systems biology.迈向计算系统生物学。
Cell Biochem Biophys. 2004;40(2):167-84. doi: 10.1385/CBB:40:2:167.
3
End of the interlude?插曲结束了?
Nat Biotechnol. 2004 Oct;22(10):1191. doi: 10.1038/nbt1004-1191.
4
P systems applications to systems biology.膜计算系统在系统生物学中的应用。
Biosystems. 2008 Mar;91(3):435-7. doi: 10.1016/j.biosystems.2007.07.002. Epub 2007 Jul 17.
5
Gene regulatory network inference: data integration in dynamic models-a review.基因调控网络推断:动态模型中的数据整合——综述
Biosystems. 2009 Apr;96(1):86-103. doi: 10.1016/j.biosystems.2008.12.004. Epub 2008 Dec 27.
6
Stochastic P systems and the simulation of biochemical processes with dynamic compartments.随机P系统与具有动态隔室的生化过程模拟。
Biosystems. 2008 Mar;91(3):458-72. doi: 10.1016/j.biosystems.2006.12.009. Epub 2007 Jul 17.
7
Simulating complex intracellular processes using object-oriented computational modelling.使用面向对象计算建模模拟复杂的细胞内过程。
Prog Biophys Mol Biol. 2004 Nov;86(3):379-406. doi: 10.1016/j.pbiomolbio.2003.11.001.
8
The challenges of modeling mammalian biocomplexity.构建哺乳动物生物复杂性模型的挑战。
Nat Biotechnol. 2004 Oct;22(10):1268-74. doi: 10.1038/nbt1015.
9
Bioinformatics and cellular signaling.生物信息学与细胞信号传导
Curr Opin Biotechnol. 2004 Feb;15(1):78-81. doi: 10.1016/j.copbio.2004.01.003.
10
Dialogue on reverse-engineering assessment and methods: the DREAM of high-throughput pathway inference.逆向工程评估与方法对话:高通量通路推断之梦
Ann N Y Acad Sci. 2007 Dec;1115:1-22. doi: 10.1196/annals.1407.021. Epub 2007 Oct 9.

引用本文的文献

1
Advances in the Discovery and Engineering of Gene Targets for Carotenoid Biosynthesis in Recombinant Strains.基因靶点在重组菌株类胡萝卜素生物合成中的发现和工程技术进展。
Biomolecules. 2023 Dec 5;13(12):1747. doi: 10.3390/biom13121747.
2
Physicochemical and metabolic constraints for thermodynamics-based stoichiometric modelling under mesophilic growth conditions.适用于中温生长条件下基于热力学的计量衡算模型的物理化学和代谢约束。
PLoS Comput Biol. 2021 Jan 25;17(1):e1007694. doi: 10.1371/journal.pcbi.1007694. eCollection 2021 Jan.
3
Metabolic Engineering for the Production of Lycopene.
用于生产番茄红素的代谢工程。
Molecules. 2020 Jul 9;25(14):3136. doi: 10.3390/molecules25143136.
4
Harnessing biocompatible chemistry for developing improved and novel microbial cell factories.利用生物相容性化学开发改良的新型微生物细胞工厂。
Microb Biotechnol. 2020 Jan;13(1):54-66. doi: 10.1111/1751-7915.13472. Epub 2019 Aug 6.
5
Continuous Culture Adaptation of AM1 and TK 0001 to Very High Methanol Concentrations.AM1和TK 0001对高甲醇浓度的连续培养适应性
Front Microbiol. 2019 Jun 20;10:1313. doi: 10.3389/fmicb.2019.01313. eCollection 2019.
6
The ancestral levels of transcription and the evolution of sexual phenotypes in filamentous fungi.丝状真菌转录的祖先水平与有性表型的进化
PLoS Genet. 2017 Jul 13;13(7):e1006867. doi: 10.1371/journal.pgen.1006867. eCollection 2017 Jul.
7
Microbial production strategies and applications of lycopene and other terpenoids.番茄红素及其他萜类化合物的微生物生产策略与应用
World J Microbiol Biotechnol. 2016 Jan;32(1):15. doi: 10.1007/s11274-015-1975-2. Epub 2015 Dec 29.
8
Integrated, systems metabolic picture of acetone-butanol-ethanol fermentation by Clostridium acetobutylicum.丙酮丁醇梭菌丙酮-丁醇-乙醇发酵的综合系统代谢图谱
Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):8505-10. doi: 10.1073/pnas.1423143112. Epub 2015 Jun 22.
9
Engineering synergy in biotechnology.生物技术中的工程协同作用。
Nat Chem Biol. 2014 May;10(5):319-22. doi: 10.1038/nchembio.1519.
10
Genome replication engineering assisted continuous evolution (GREACE) to improve microbial tolerance for biofuels production.基因组复制工程辅助连续进化(GREACE)提高微生物对生物燃料生产的耐受性。
Biotechnol Biofuels. 2013 Sep 27;6(1):137. doi: 10.1186/1754-6834-6-137.