皮质表面分割与映射
Cortical surface segmentation and mapping.
作者信息
Tosun Duygu, Rettmann Maryam E, Han Xiao, Tao Xiaodong, Xu Chenyang, Resnick Susan M, Pham Dzung L, Prince Jerry L
机构信息
Department of Electrical and Computer, Engineering Johns Hopkins University, Baltimore, MD 21218, USA.
出版信息
Neuroimage. 2004;23 Suppl 1(0 1):S108-18. doi: 10.1016/j.neuroimage.2004.07.042.
Abstract
Segmentation and mapping of the human cerebral cortex from magnetic resonance (MR) images plays an important role in neuroscience and medicine. This paper describes a comprehensive approach for cortical reconstruction, flattening, and sulcal segmentation. Robustness to imaging artifacts and anatomical consistency are key achievements in an overall approach that is nearly fully automatic and computationally fast. Results demonstrating the application of this approach to a study of cortical thickness changes in aging are presented.
摘要
从磁共振（MR）图像中对人类大脑皮层进行分割和映射在神经科学和医学中起着重要作用。本文描述了一种用于皮层重建、扁平化和脑沟分割的综合方法。在一种几乎完全自动化且计算速度快的整体方法中，对成像伪影的鲁棒性和解剖学一致性是关键成果。展示了该方法在衰老过程中皮层厚度变化研究中的应用结果。
相似文献
1
Cortical surface segmentation and mapping.皮质表面分割与映射
Neuroimage. 2004;23 Suppl 1(0 1):S108-18. doi: 10.1016/j.neuroimage.2004.07.042.
2
CRUISE: cortical reconstruction using implicit surface evolution.CRUISE：使用隐式曲面演化进行皮质重建。
Neuroimage. 2004 Nov;23(3):997-1012. doi: 10.1016/j.neuroimage.2004.06.043.
3
Automatic cortical sulcal parcellation based on surface principal direction flow field tracking.基于表面主方向流场追踪的自动脑沟分区
Neuroimage. 2009 Jul 15;46(4):923-37. doi: 10.1016/j.neuroimage.2009.03.039. Epub 2009 Mar 25.
4
Consistent reconstruction of cortical surfaces from longitudinal brain MR images.从纵向脑磁共振图像中持续重建皮质表面。
Med Image Comput Comput Assist Interv. 2011;14(Pt 2):671-9. doi: 10.1007/978-3-642-23629-7_82.
5
Automated 3-D extraction of inner and outer surfaces of cerebral cortex from MRI.从磁共振成像（MRI）中自动三维提取大脑皮质的内表面和外表面。
Neuroimage. 2000 Sep;12(3):340-56. doi: 10.1006/nimg.1999.0534.
6
Cortical reconstruction using implicit surface evolution: accuracy and precision analysis.使用隐式曲面演化进行皮质重建：准确性和精确性分析。
Neuroimage. 2006 Feb 1;29(3):838-52. doi: 10.1016/j.neuroimage.2005.08.061. Epub 2005 Nov 2.
7
Bayesian construction of geometrically based cortical thickness metrics.基于几何学的皮质厚度指标的贝叶斯构建
Neuroimage. 2000 Dec;12(6):676-87. doi: 10.1006/nimg.2000.0666.
8
Topology correction in brain cortex segmentation using a multiscale, graph-based algorithm.使用基于图的多尺度算法进行脑皮质分割中的拓扑校正。
IEEE Trans Med Imaging. 2002 Feb;21(2):109-21. doi: 10.1109/42.993130.
9
Cortical surface mapping using topology correction, partial flattening and 3D shape context-based non-rigid registration for use in quantifying atrophy in Alzheimer's disease.基于拓扑校正、部分扁平化和 3D 形状上下文的非刚性配准的皮质表面映射，用于量化阿尔茨海默病中的萎缩。
J Neurosci Methods. 2012 Mar 30;205(1):96-109. doi: 10.1016/j.jneumeth.2011.12.011. Epub 2011 Dec 29.
10
Mapping techniques for aligning sulci across multiple brains.用于在多个大脑中对齐脑沟的映射技术。
Med Image Anal. 2004 Sep;8(3):295-309. doi: 10.1016/j.media.2004.06.020.
引用本文的文献
1
Layer-specific changes in sensory cortex across the lifespan in mice and humans.小鼠和人类一生中感觉皮层的层特异性变化。
Nat Neurosci. 2025 Aug 11. doi: 10.1038/s41593-025-02013-1.
2
Analysis of cortical morphometric variability using labeled cortical distance maps.使用标记的皮质距离图分析皮质形态测量变异性。
Stat Interface. 2017;10(2):313-341. doi: 10.4310/sii.2017.v10.n2.a13. Epub 2016 Oct 31.
3
The 3D Structural Architecture of the Human Hand Area Is Nontopographic.人类手部区域的 3D 结构架构是非地形的。
J Neurosci. 2023 May 10;43(19):3456-3476. doi: 10.1523/JNEUROSCI.1692-22.2023. Epub 2023 Mar 31.
4
Automatic segmentation and volumetric assessment of internal organs and fatty tissue: what are the benefits?内部器官和脂肪组织的自动分割与容积评估：有哪些益处？
MAGMA. 2022 Apr;35(2):187-192. doi: 10.1007/s10334-021-00986-1. Epub 2021 Dec 17.
5
Feedback contribution to surface motion perception in the human early visual cortex.反馈对人类早期视觉皮层表面运动感知的贡献。
Elife. 2020 Jun 4;9:e50933. doi: 10.7554/eLife.50933.
6
Cortical depth profiles of luminance contrast responses in human V1 and V2 using 7 T fMRI.使用 7T fMRI 测量人类 V1 和 V2 的亮度对比度反应的皮质深度分布。
Hum Brain Mapp. 2018 Jul;39(7):2812-2827. doi: 10.1002/hbm.24042. Epub 2018 Mar 25.
7
Reconstruction of the human cerebral cortex robust to white matter lesions: method and validation.重建对大脑白质病变具有鲁棒性的人类大脑皮质：方法与验证。
Hum Brain Mapp. 2014 Jul;35(7):3385-401. doi: 10.1002/hbm.22409. Epub 2013 Dec 31.
8
Quantitative analysis of structural neuroimaging of mesial temporal lobe epilepsy.内侧颞叶癫痫的结构神经影像学定量分析
Imaging Med. 2013 Jun 1;5(3). doi: 10.2217/iim.13.28.
9
Collaborative Labeling of Malignant Glioma with WebMILL: A First Look.使用WebMILL对恶性胶质瘤进行协作标记：初步观察。
Proc SPIE Int Soc Opt Eng. 2012 Apr 5;8318. doi: 10.1117/12.910802.
10
Diffeomorphic sulcal shape analysis on the cortex.脑回形态的可变形分析。
IEEE Trans Med Imaging. 2012 Jun;31(6):1195-212. doi: 10.1109/TMI.2012.2186975. Epub 2012 Feb 6.
本文引用的文献
1
Improved Localizadon of Cortical Activity by Combining EEG and MEG with MRI Cortical Surface Reconstruction: A Linear Approach.通过将 EEG 和 MEG 与 MRI 皮质表面重建相结合来提高皮质活动的本地化：一种线性方法。
J Cogn Neurosci. 1993 Spring;5(2):162-76. doi: 10.1162/jocn.1993.5.2.162.
2
Mapping techniques for aligning sulci across multiple brains.用于在多个大脑中对齐脑沟的映射技术。
Med Image Anal. 2004 Sep;8(3):295-309. doi: 10.1016/j.media.2004.06.020.
3
An Eulerian PDE approach for computing tissue thickness.一种用于计算组织厚度的欧拉偏微分方程方法。
IEEE Trans Med Imaging. 2003 Oct;22(10):1332-9. doi: 10.1109/TMI.2003.817775.
4
Topology correction in brain cortex segmentation using a multiscale, graph-based algorithm.使用基于图的多尺度算法进行脑皮质分割中的拓扑校正。
IEEE Trans Med Imaging. 2002 Feb;21(2):109-21. doi: 10.1109/42.993130.
5
Automated sulcal segmentation using watersheds on the cortical surface.利用皮质表面分水岭算法进行自动脑沟分割。
Neuroimage. 2002 Feb;15(2):329-44. doi: 10.1006/nimg.2001.0975.
6
Automated graph-based analysis and correction of cortical volume topology.基于自动图形的皮质体积拓扑分析与校正
IEEE Trans Med Imaging. 2001 Nov;20(11):1167-77. doi: 10.1109/42.963819.
7
A fast marching level set method for monotonically advancing fronts.一种用于单调推进前沿的快速行进水平集方法。
Proc Natl Acad Sci U S A. 1996 Feb 20;93(4):1591-5. doi: 10.1073/pnas.93.4.1591.
8
Computerized mappings of the cerebral cortex: a multiresolution flattening method and a surface-based coordinate system.大脑皮层的计算机映射：一种多分辨率扁平化方法和基于表面的坐标系。
J Cogn Neurosci. 1996;8(1):1-28. doi: 10.1162/jocn.1996.8.1.1.
9
An efficient algorithm for topologically correct segmentation of the cortical sheet in anatomical mr volumes.一种用于在解剖学磁共振成像体积中对皮质层进行拓扑正确分割的高效算法。
Neuroimage. 2001 Aug;14(2):329-46. doi: 10.1006/nimg.2001.0831.
10
Mapping visual cortex in monkeys and humans using surface-based atlases.使用基于表面的图谱绘制猴子和人类的视觉皮层。
Vision Res. 2001;41(10-11):1359-78. doi: 10.1016/s0042-6989(01)00045-1.
Zotero 插件