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基于A549和BGMK细胞系组合的细胞培养-聚合酶链反应检测法及分子鉴定在监测河水中传染性腺病毒和肠道病毒方面的应用。

Use of cell culture-PCR assay based on combination of A549 and BGMK cell lines and molecular identification as a tool to monitor infectious adenoviruses and enteroviruses in river water.

作者信息

Lee Cheonghoon, Lee Seung-Hoon, Han Euiri, Kim Sang-Jong

机构信息

School of Biological Sciences, College of Natural Sciences, Seoul National University, Seoul, South Korea.

出版信息

Appl Environ Microbiol. 2004 Nov;70(11):6695-705. doi: 10.1128/AEM.70.11.6695-6705.2004.

Abstract

Viral contamination in environmental samples can be underestimated because a single cell line might reproduce only some enteric viruses and some enteric viruses do not exhibit apparent cytopathic effects in cell culture. To overcome this problem, we evaluated a cell culture-PCR assay based on a combination of A549 and Buffalo green monkey kidney (BGMK) cell lines as a tool to monitor infectious adenoviruses and enteroviruses in river water. Water samples were collected 10 times at each of four rivers located in Gyeonggi Province, South Korea, and then cultured on group 1 cells (BGMK cells alone) and group 2 cells (BGMK and A549 cells). Reverse transcription and multiplex PCR were performed, followed by phylogenetic analysis of the amplicons. Thirty (75.0%) of the 40 samples were positive for viruses based on cell culture, and the frequency of positive samples grown on group 2 cells (65.0%) was higher than the frequency of positive samples grown on group 1 cells (50.0%). The number of samples positive for adenoviruses was higher with A549 cells (13 samples) than with BGMK cells (one sample); the numbers of samples positive for enteroviruses were similar with both types of cells. By using phylogenetic analysis, adenoviral amplicons were grouped into subgenera A, C, D, and F, and enteroviral amplicons were grouped into coxsackieviruses B3 and B4 and echoviruses 6, 7, and 30, indicating that A549 and BGMK cells were suitable for recovering a wide range of adenoviral and enteroviral types. The cell culture-PCR assay with a combination of A549 and BGMK cells and molecular identification could be a useful tool for monitoring infectious adenoviruses and enteroviruses in aquatic environments.

摘要

环境样本中的病毒污染可能被低估,因为单一细胞系可能仅能繁殖某些肠道病毒,且一些肠道病毒在细胞培养中不会表现出明显的细胞病变效应。为克服这一问题,我们评估了一种基于A549和布法罗绿猴肾(BGMK)细胞系组合的细胞培养 - PCR检测方法,作为监测河水中传染性腺病毒和肠道病毒的工具。在韩国京畿道的四条河流中,每条河流各采集10次水样,然后分别在第1组细胞(仅BGMK细胞)和第2组细胞(BGMK和A549细胞)上进行培养。进行逆转录和多重PCR,随后对扩增子进行系统发育分析。基于细胞培养,40个样本中有30个(75.0%)病毒呈阳性,在第2组细胞上生长的阳性样本频率(65.0%)高于在第1组细胞上生长的阳性样本频率(50.0%)。A549细胞检测出腺病毒阳性的样本数量(13个样本)高于BGMK细胞(1个样本);两种细胞类型检测出肠道病毒阳性的样本数量相似。通过系统发育分析,腺病毒扩增子被分为A、C、D和F亚属,肠道病毒扩增子被分为柯萨奇病毒B3和B4以及埃可病毒6、7和30,这表明A549和BGMK细胞适合于分离多种腺病毒和肠道病毒类型。结合A549和BGMK细胞的细胞培养 - PCR检测方法及分子鉴定可能是监测水生环境中传染性腺病毒和肠道病毒的有用工具。

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本文引用的文献

1
Increased Efficiency of Group B Coxsackievirus Isolation from Clinical Specimens by Use of BGM Cells.
J Clin Microbiol. 1982 May;15(5):945-8. doi: 10.1128/jcm.15.5.945-948.1982.
2
Inactivation of feline calicivirus and adenovirus type 40 by UV radiation.
Appl Environ Microbiol. 2003 Jan;69(1):577-82. doi: 10.1128/AEM.69.1.577-582.2003.
4
Microbial source tracking: current methodology and future directions.
Appl Environ Microbiol. 2002 Dec;68(12):5796-803. doi: 10.1128/AEM.68.12.5796-5803.2002.
5
Evaluation of integrated cell culture-PCR (C-PCR) for virological analysis of environmental samples.
J Appl Microbiol. 2002;93(5):745-50. doi: 10.1046/j.1365-2672.2002.01741.x.
6
Comparative inactivation of enteroviruses and adenovirus 2 by UV light.
Appl Environ Microbiol. 2002 Oct;68(10):5167-9. doi: 10.1128/AEM.68.10.5167-5169.2002.
7
Molecular identification of enterovirus by analyzing a partial VP1 genomic region with different methods.
J Clin Microbiol. 2002 Jan;40(1):182-92. doi: 10.1128/JCM.40.1.182-192.2002.
8
Detection of infectious enteroviruses and adenoviruses in tap water in urban areas in Korea.
Water Res. 2002 Jan;36(1):248-56. doi: 10.1016/s0043-1354(01)00199-3.

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