Schäffer Christina, Franck William L, Scheberl Andrea, Kosma Paul, McDermott Timothy R, Messner Paul
Center for NanoBiotechnology, University of Applied Life Sciences and Natural Resources, A-1180 Wien, Austria.
Thermal Biology Institute, Montana State University, Bozeman, MT 59717-3142, USA.
Int J Syst Evol Microbiol. 2004 Nov;54(Pt 6):2361-2368. doi: 10.1099/ijs.0.63227-0.
Two moderately thermophilic, Gram-positive, spore-forming bacteria were isolated from different geographical locations and sources; strain GS5-97(T) from a beet sugar factory in Leopoldsdorf, Lower Austria, and strain YNP10 from a geothermally heated soil, Yellowstone National Park, USA. The sequences of their 16S rRNA genes were found to be 99.8% identical, and DNA-DNA hybridization experiments revealed that strains GS5-97(T) and YNP10 share 89.9 mol% similarity to each other, but only 34.3 and 39.2 mol% similarity, respectively, to Geobacillus caldoxylosilyticus DSM 12041(T), which is their closest related type strain. A polyphasic analysis showed that these two isolates were more similar to each other than to other characterized geobacilli. Their DNA G+C content was 43.2 and 42.4 mol%, respectively, and they were identical with respect to many phenotypic features (e.g. T(opt) 55 degrees C; pH(opt) 7.0). Both strains clearly displayed best growth when cultured aerobically. They differed slightly in their cellular fatty acid profiles and polar lipid pattern, and genotypically they could also be distinguished based on randomly amplified polymorphic DNA fingerprints and internal transcribed spacer analysis. Freeze-etching experiments revealed oblique surface layer (S-layer) lattices in both strains, and biochemical analyses of the purified S-layer proteins indicated the occurrence of glycosylation. Based on the properties of these organisms relative to those currently documented for the genus Geobacillus and for the various sister genera in the Bacillus radiation, a novel species is proposed, Geobacillus tepidamans sp. nov., with GS5-97(T) (=ATCC BAA-942(T)=DSM 16325(T)) as the type strain. Strain YNP10 has been deposited in the American Type Culture Collection as ATCC BAA-943.
从不同地理位置和来源分离出两株中度嗜热、革兰氏阳性、产芽孢细菌;菌株GS5-97(T) 来自奥地利下奥地利州莱奥波德多夫的一家甜菜糖厂,菌株YNP10来自美国黄石国家公园地热加热的土壤。发现它们16S rRNA基因序列的同一性为99.8%,DNA-DNA杂交实验表明,菌株GS5-97(T) 和YNP10彼此间的相似性为89.9 mol%,但与它们亲缘关系最近的模式菌株嗜热栖热地芽孢杆菌Geobacillus caldoxylosilyticus DSM 12041(T) 的相似性分别仅为34.3 mol%和39.2 mol%。多相分析表明,这两株分离物彼此之间的相似性高于与其他已鉴定的地芽孢杆菌。它们的DNA G+C含量分别为43.2 mol%和42.4 mol%,在许多表型特征方面相同(例如,最适温度55℃;最适pH 7.0)。两株菌株在需氧培养时均明显表现出最佳生长。它们的细胞脂肪酸谱和极性脂质模式略有不同,在基因型上也可以通过随机扩增多态性DNA指纹图谱和内转录间隔区分析加以区分。冷冻蚀刻实验显示两株菌株均有倾斜的表层(S层)晶格,对纯化的S层蛋白进行生化分析表明存在糖基化现象。基于这些菌株相对于目前已记录的地芽孢杆菌属及芽孢杆菌类群中各个姐妹属的特性,提出一个新种,嗜温地芽孢杆菌Geobacillus tepidamans sp. nov.,以GS5-97(T)(=ATCC BAA-942(T)=DSM 16325(T))作为模式菌株。菌株YNP10已保藏于美国模式培养物保藏中心,保藏编号为ATCC BAA-943。