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厚壁菌门芽胞杆菌属的分类修订:芽胞杆菌属、嗜热脂肪芽孢杆菌、詹氏甲烷球菌、突泉热芽孢杆菌、嗜热脱硫杆菌和嗜热葡糖淀粉酶芽孢杆菌的修正定义(原名“thermoglucosidasius”);将南极芽孢杆菌归到厚壁菌门芽胞杆菌属,作为厚壁菌门芽胞杆菌属南极芽孢杆菌复合种;弱小火球菌的无效命名,新拟名弱小火球菌属,新拟名;热纤梭菌的转移,作为纤梭菌属热纤梭菌复合种;以及新拟名产钙极端嗜热杆菌的建议。

Taxonomic revision of the genus Geobacillus: emendation of Geobacillus, G. stearothermophilus, G. jurassicus, G. toebii, G. thermodenitrificans and G. thermoglucosidans (nom. corrig., formerly 'thermoglucosidasius'); transfer of Bacillus thermantarcticus to the genus as G. thermantarcticus comb. nov.; proposal of Caldibacillus debilis gen. nov., comb. nov.; transfer of G. tepidamans to Anoxybacillus as A. tepidamans comb. nov.; and proposal of Anoxybacillus caldiproteolyticus sp. nov.

机构信息

Laboratory of Microbiology, Department of Biochemistry and Microbiology, Ghent University, K. L. Ledeganckstraat 35, 9000 Ghent, Belgium.

Department of Applied Engineering Sciences, Laboratory of Biochemistry and Brewing, University College Ghent, Valentin Vaerwyckweg 1, 9000 Ghent, Belgium.

出版信息

Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1470-1485. doi: 10.1099/ijs.0.030346-0. Epub 2011 Aug 19.

Abstract

Sixty-two strains of thermophilic aerobic endospore-forming bacteria were subjected to polyphasic taxonomic study including 16S rRNA gene sequence analysis, polar lipid and fatty acid analysis, phenotypic characterization, and DNA-DNA hybridization experiments. Distinct clusters of the species Geobacillus stearothermophilus, Geobacillus thermodenitrificans, Geobacillus toebii and Geobacillus thermoglucosidasius were formed, allowing their descriptions to be emended, and the distinctiveness of the poorly represented species Geobacillus jurassicus, Geobacillus subterraneus and Geobacillus caldoxylosilyticus was confirmed. It is proposed that the name Geobacillus thermoglucosidasius be corrected to Geobacillus thermoglucosidans nom. corrig. Bacillus thermantarcticus clustered between Geobacillus species on the basis of 16S rRNA gene sequence analysis, and its transfer to the genus Geobacillus as Geobacillus thermantarcticus comb. nov. (type strain LMG 23032(T)=DSM 9572(T)=strain M1(T)=R-35644(T)) is proposed. The above-mentioned species, together with Geobacillus thermoleovorans and Geobacillus thermocatenulatus, form a monophyletic cluster representing the genus Geobacillus. The distinctiveness of 'Geobacillus caldoproteolyticus' was confirmed and it is proposed that it be accommodated, along with Geobacillus tepidamans, in the genus Anoxybacillus as Anoxybacillus caldiproteolyticus sp. nov. (type strain DSM 15730(T)=ATCC BAA-818(T)=LMG 26209(T)=R-35652(T)) and Anoxybacillus tepidamans comb. nov. (type strain LMG 26208(T)=ATCC BAA-942(T)=DSM 16325(T)=R-35643(T)), respectively. The type strain of Geobacillus debilis was not closely related to any members of the genera Anoxybacillus and Geobacillus, and it is proposed that this species be placed in the new genus Caldibacillus as Caldibacillus debilis gen. nov. comb. nov. The type strain of the type species, Caldibacillus debilis, is LMG 23386(T) (=DSM 16016(T)=NCIMB 13995(T)=Tf(T)=R-35653(T)).

摘要

62 株嗜热需氧内生孢子形成细菌进行了多相分类研究,包括 16S rRNA 基因序列分析、极性脂质和脂肪酸分析、表型特征和 DNA-DNA 杂交实验。形成了明显的嗜热脂肪芽孢杆菌、嗜热地芽孢杆菌、耐热地芽孢杆菌和嗜热葡萄糖淀粉酶芽孢杆菌种簇,允许对其描述进行修正,并确认了代表性较差的嗜热解木聚糖芽孢杆菌、地下芽孢杆菌和嗜热木聚糖芽孢杆菌的独特性。建议将 Geobacillus thermoglucosidasius 的名称更正为 Geobacillus thermoglucosidans nom. corrig. 基于 16S rRNA 基因序列分析,Bacillus thermantarcticus 聚在 Geobacillus 种内,建议将其转移到 Geobacillus 属中,作为 Geobacillus thermantarcticus comb. nov.(模式株 LMG 23032(T)=DSM 9572(T)=strain M1(T)=R-35644(T))。上述物种与 Geobacillus thermoleovorans 和 Geobacillus thermocatenulatus 一起形成一个单系簇,代表 Geobacillus 属。“Geobacillus caldoproteolyticus”的独特性得到了确认,并建议将其与 Geobacillus tepidamans 一起归入 Anoxybacillus 属,作为 Anoxybacillus caldiproteolyticus sp. nov.(模式株 DSM 15730(T)=ATCC BAA-818(T)=LMG 26209(T)=R-35652(T))和 Anoxybacillus tepidamans comb. nov.(模式株 LMG 26208(T)=ATCC BAA-942(T)=DSM 16325(T)=R-35643(T))。Geobacillus debilis 的模式株与 Anoxybacillus 和 Geobacillus 属的任何成员都没有密切关系,建议将该种归入新属 Caldibacillus 中,作为 Caldibacillus debilis gen. nov. comb. nov. 模式种的模式株是 Caldibacillus debilis,LMG 23386(T)=DSM 16016(T)=NCIMB 13995(T)=Tf(T)=R-35653(T)。

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