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柔弱嗜热栖热菌新种,一种从凉爽土壤环境中分离出的新型专性嗜热细菌,以及将苍白芽孢杆菌重新分类为苍白嗜热栖热菌新组合。

Geobacillus debilis sp. nov., a novel obligately thermophilic bacterium isolated from a cool soil environment, and reassignment of Bacillus pallidus to Geobacillus pallidus comb. nov.

作者信息

Banat Ibrahim M, Marchant Roger, Rahman Thahira J

机构信息

School of Biomedical Sciences, University of Ulster, Coleraine, County Londonderry BT52 1SA, Northern Ireland, UK.

出版信息

Int J Syst Evol Microbiol. 2004 Nov;54(Pt 6):2197-2201. doi: 10.1099/ijs.0.63231-0.

Abstract

Several aerobic, motile, rod-shaped, thermophilic, spore-forming Geobacillus bacteria predominantly giving a Gram-positive staining reaction were isolated from a cool soil environment in Northern Ireland and taxonomically investigated. Two isolates, F10 and Tf(T), showed low 16S rRNA gene sequence similarity to recognized members of the genus Geobacillus. Phylogenetic tree investigation using neighbour-joining, maximum-likelihood and parsimony methods indicated that strains F10 and Tf(T) represent a single novel species, for which the name Geobacillus debilis sp. nov. is proposed, with type strain Tf(T) (=DSM 16016(T)=NCIMB 13995(T)) and which belongs to a subgroup of the genus Geobacillus comprising Geobacillus toebii and Geobacillus caldoxylosilyticus. However, G. debilis showed closest affinities to Bacillus pallidus, which we propose should become Geobacillus pallidus comb. nov.

摘要

从北爱尔兰的一个凉爽土壤环境中分离出了几种需氧、能动、杆状、嗜热、产芽孢的地芽孢杆菌属细菌,这些细菌主要呈现革兰氏阳性染色反应,并对其进行了分类学研究。两个分离株F10和Tf(T)与已确认的地芽孢杆菌属成员的16S rRNA基因序列相似性较低。使用邻接法、最大似然法和简约法进行的系统发育树研究表明,菌株F10和Tf(T)代表一个新的单一物种,为此提出了地芽孢杆菌脆弱种(Geobacillus debilis sp. nov.)的名称,模式菌株为Tf(T)(=DSM 16016(T)=NCIMB 13995(T)),它属于地芽孢杆菌属的一个亚群,该亚群包括嗜热栖热地芽孢杆菌(Geobacillus toebii)和解木糖嗜热地芽孢杆菌(Geobacillus caldoxylosilyticus)。然而,脆弱地芽孢杆菌与苍白芽孢杆菌(Bacillus pallidus)亲缘关系最近,我们提议将其重新组合为苍白地芽孢杆菌(Geobacillus pallidus comb. nov.)。

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