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中国麻黄属植物核糖体DNA非编码区及叶绿体DNA序列的系统发育分析

Phylogenetic analysis of the DNA sequence of the non-coding region of nuclear ribosomal DNA and chloroplast of Ephedra plants in China.

作者信息

Long Changfeng, Kakiuchi Nobuko, Takahashi Akira, Komatsu Katsuko, Cai Shaoqing, Mikage Masayuki

机构信息

Faculty of Pharmaceutical Sciences, Kanazawa University, Kanazawa, Japan.

出版信息

Planta Med. 2004 Nov;70(11):1080-4. doi: 10.1055/s-2004-832651.

DOI:10.1055/s-2004-832651
PMID:15549666
Abstract

Twenty-four Ephedra plants belonging to 8 species grown in the northern and western parts of China were phylogenetically analyzed for their non-coding DNA sequences, internal transcribed spacers (ITSs) of nuclear ribosomal DNA as well as trnL intron and intergenic spacers between trnL and trnF (trnL/ trnF) of the chloroplast. Based on the ITS sequences, the 8 species could be divided into 3 groups: Group 1 (Ephedra intermedia, E. sinica, E. przewalskii), Group 2 (E. equisetina, E. monosperma, E. gerardiana), and Group 3 (E. likiangensis, E. minuta). The species classified into Group 1 grow mainly in the north, Group 3 in the south and Group 2 in the center, suggesting their genetic and geographic relationships. A specific primer set was designed to classify the 3 groups by routine PCR. Combined analysis of ITS and trnL/ trnF differentiated the 8 Ephedra species.

摘要

对生长在中国北方和西部的隶属于8个物种的24株麻黄属植物进行了系统发育分析,分析对象包括它们的非编码DNA序列、核糖体DNA的内部转录间隔区(ITS)以及叶绿体的trnL内含子和trnL与trnF之间的基因间隔区(trnL/trnF)。基于ITS序列,这8个物种可分为3组:第1组(中麻黄、草麻黄、膜果麻黄),第2组(木贼麻黄、单子麻黄、藏麻黄),以及第3组(丽江麻黄、矮麻黄)。归入第1组的物种主要生长在北方,第3组生长在南方,第2组生长在中部,这表明了它们的遗传和地理关系。设计了一套特异性引物,通过常规PCR对这3组进行分类。ITS和trnL/trnF的联合分析区分了8种麻黄属植物。

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