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一种考虑酶浓度之间相关性的代谢控制理论扩展。

An extension to the metabolic control theory taking into account correlations between enzyme concentrations.

作者信息

Lion Sébastien, Gabriel Frédéric, Bost Bruno, Fiévet Julie, Dillmann Christine, de Vienne Dominique

机构信息

UMR de Génétique Végétale, INRA/UPS/CNRS/INAPG, Ferme du Moulon, Gif-sur-Yvette, France.

出版信息

Eur J Biochem. 2004 Nov;271(22):4375-91. doi: 10.1111/j.1432-1033.2004.04375.x.

Abstract

The classical metabolic control theory [Kacser, H. & Burns, J.A. (1973) Symp. Soc. Exp. Biol.27, 65-104; Heinrich, R. & Rapoport, T. (1974) Eur. J. Biochem.42, 89-95.] does not take into account experimental evidence for correlations between enzyme concentrations in the cell. We investigated the implications of two causes of linear correlations: competition between enzymes, which is a mere physical adaptation of the cell to the limitation of resources and space, and regulatory correlations, which result from the existence of regulatory networks. These correlations generate redistribution of enzyme concentrations when the concentration of an enzyme varies; this may dramatically alter the flux and metabolite concentration curves. In particular, negative correlations cause the flux to have a maximum value for a defined distribution of enzyme concentrations. Redistribution coefficients of enzyme concentrations allowed us to calculate the 'combined response coefficient' that quantifies the response of flux or metabolite concentration to a perturbation of enzyme concentration.

摘要

经典代谢控制理论[卡瑟,H. & 伯恩斯,J.A.(1973年)《实验生物学学会专题讨论会》27卷,65 - 104页;海因里希,R. & 拉波波特,T.(1974年)《欧洲生物化学杂志》42卷,89 - 95页]未考虑细胞中酶浓度之间相关性的实验证据。我们研究了线性相关性的两个原因的影响:酶之间的竞争,这仅仅是细胞对资源和空间限制的一种物理适应,以及调节相关性,这是由调节网络的存在导致的。当一种酶的浓度变化时,这些相关性会导致酶浓度的重新分布;这可能会显著改变通量和代谢物浓度曲线。特别是,负相关性会使通量在酶浓度的特定分布下具有最大值。酶浓度的重新分布系数使我们能够计算“组合响应系数”,该系数量化了通量或代谢物浓度对酶浓度扰动的响应。

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