HCPM——蛋白质模型层次聚类程序。
HCPM--program for hierarchical clustering of protein models.
作者信息
Gront Dominik, Kolinski Andrzej
机构信息
Faculty of Chemistry, Warsaw University Pasteura 1, 02-093 Warsaw, Poland.
出版信息
Bioinformatics. 2005 Jul 15;21(14):3179-80. doi: 10.1093/bioinformatics/bti450. Epub 2005 Apr 19.
Abstract
HCPM is a tool for clustering protein structures from comparative modeling, ab initio structure prediction, etc. A hierarchical clustering algorithm is designed and tested, and a heuristic is provided for an optimal cluster selection. The method has been successfully tested during the CASP6 experiment.
摘要
HCPM是一种用于对来自比较建模、从头算结构预测等的蛋白质结构进行聚类的工具。设计并测试了一种层次聚类算法，并提供了一种用于最优聚类选择的启发式方法。该方法已在CASP6实验中成功测试。
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