Hoffmann Harald, Stindl Sibylle, Ludwig Wolfgang, Stumpf Anita, Mehlen André, Heesemann Jürgen, Monget Daniel, Schleifer Karl H, Roggenkamp Andreas
Institute of Microbiology and Laboratory Medicine, Pneumatological Hospital, Robert-Koch-Allee 2, D-82131 Gauting, Germany.
Syst Appl Microbiol. 2005 Apr;28(3):196-205. doi: 10.1016/j.syapm.2004.12.010.
The taxonomic position of Enterobacter dissolvens was re-evaluated based on the analysis of the type strain ATCC 23373T and three clinical isolates. The strains were assigned to the genetic cluster of the species by phylogenetic sequence analysis in the frame of a recent population genetic study. The relatedness of E. dissolves to the other species of the E. cloacae complex was analyzed by DNA-DNA hybridization studies based on melting profiles in microplates. The genetic cluster of E. dissolvens fell into the same DNA-relatedness group like E. cloacae with mean deltaTm-values of 3.9 degrees C confirming the hybridization results of three former studies. Phenotypic analysis of the E. cloacae and E. dissolvens strains, respectively, based on 115 biochemical reactions yielded the esculin test as the only one differentiating between them by being positive for E. dissolvens and negative for E. cloacae strains. The name E. cloacae subsp. dissolvens comb. nov. is proposed for the group of organisms formerly referred to as E. dissolvens, and the name E. cloacae subsp. cloacae comb. nov. for the group of organisms formerly referred to as E. cloacae. The species descriptions of Enterobacter kobei and Enterobacter asburiae were emended based on the data collected on 17 and 15 strains, respectively. The strains were assigned to the respective species by a combination of phylogenetic sequence analyzes and DNA-DNA hybridizations. Phenotypic analyzes of 115 reactions gave detailed species profiles with new differentiating phenotypic properties.
基于对模式菌株ATCC 23373T和三株临床分离株的分析,重新评估了溶解肠杆菌的分类地位。在最近一项群体遗传学研究的框架内,通过系统发育序列分析将这些菌株归入该物种的遗传簇。基于微孔板熔解曲线的DNA-DNA杂交研究分析了溶解肠杆菌与阴沟肠杆菌复合体其他物种的亲缘关系。溶解肠杆菌的遗传簇与阴沟肠杆菌属于同一DNA相关性组,平均ΔTm值为3.9℃,证实了之前三项研究的杂交结果。分别基于115种生化反应对阴沟肠杆菌和溶解肠杆菌菌株进行表型分析,结果显示七叶苷试验是唯一能区分它们的试验,溶解肠杆菌为阳性,阴沟肠杆菌菌株为阴性。建议将以前称为溶解肠杆菌的一组生物体命名为阴沟肠杆菌溶亚种,组合新名;将以前称为阴沟肠杆菌的一组生物体命名为阴沟肠杆菌阴沟亚种,组合新名。基于分别对17株和15株菌株收集的数据,对科比肠杆菌和阿氏肠杆菌的物种描述进行了修订。通过系统发育序列分析和DNA-DNA杂交相结合的方法将这些菌株归入相应的物种。115种反应的表型分析给出了具有新的鉴别表型特征的详细物种概况。