White Amanda M, Daly Don S, Willse Alan R, Protic Miroslava, Chandler Darrell P
Statistical Sciences, Pacific Northwest National Laboratory, Richland, WA 99352, USA.
Bioinformatics. 2005 Sep 1;21(17):3578-9. doi: 10.1093/bioinformatics/bti576. Epub 2005 Jul 26.
The Automated Microarray Image Analysis (AMIA) Toolbox for MATLAB is a flexible, open-source, microarray image analysis tool that allows the user to customize analyses of microarray image sets. This tool provides several methods to identify and quantify spot statistics, as well as extensive diagnostic statistics and images to evaluate data quality and array processing. The open, modular nature of AMIA provides access to implementation details and encourages modification and extension of AMIA's capabilities.
The AMIA Toolbox is freely available at http://www.pnl.gov/statistics/amia. The AMIA Toolbox requires MATLAB 6.5 (R13) (MathWorks, Inc. Natick, MA), as well as the Statistics Toolbox 4.1 and Image Processing Toolbox 4.1 for MATLAB or more recent versions.
用于MATLAB的自动微阵列图像分析（AMIA）工具箱是一个灵活的、开源的微阵列图像分析工具，允许用户自定义微阵列图像集的分析。该工具提供了多种识别和量化斑点统计数据的方法，以及用于评估数据质量和阵列处理的广泛诊断统计数据和图像。AMIA的开放、模块化性质允许访问实现细节，并鼓励对AMIA的功能进行修改和扩展。
AMIA工具箱可从http://www.pnl.gov/statistics/amia免费获取。AMIA工具箱需要MATLAB 6.5（R13）（MathWorks公司，马萨诸塞州纳蒂克），以及适用于MATLAB的统计工具箱4.1和图像处理工具箱4.1或更高版本。
