The structure of phytochrome: a picture is worth a thousand spectra.
作者信息
Rockwell Nathan C, Lagarias J Clark
机构信息
Section of Molecular and Cellular Biology, University of California, Davis, 95616, USA.
出版信息
Plant Cell. 2006 Jan;18(1):4-14. doi: 10.1105/tpc.105.038513.
Abstract
摘要
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2
Genetic and molecular analysis of phytochromes from the filamentous fungus Neurospora crassa.
Eukaryot Cell. 2005 Dec;4(12):2140-52. doi: 10.1128/EC.4.12.2140-2152.2005.
3
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4
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Biochemistry. 2005 Nov 22;44(46):15203-15. doi: 10.1021/bi051633z.
5
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