Somvanshi Vishal S, Lang Elke, Ganguly Sudershan, Swiderski Jolantha, Saxena Anil K, Stackebrandt Erko
Division of Nematology, Indian Agricultural Research Institute, New Delhi 110012, India.
Syst Appl Microbiol. 2006 Nov;29(7):519-25. doi: 10.1016/j.syapm.2006.01.004. Epub 2006 Feb 3.
In the search for novel Xenorhabdus strains in a recently described nematode species, Steinernema thermophilum, three strains (strain 28(T) = DSM 17382(T), strain 42 = DSM 17383 and strain 43 = DSM 17384) were isolated from three independent isolation approaches from crushed mixture of infective juveniles. 16S rRNA gene sequence comparison of strains 28(T) and DSM 17383 indicated identity and the phylogenetic position pointed towards an individual taxon within the phylogenetic dendrogram of Xenorhabdus type strains. The nearest phylogenetic relatives of strain 28(T) were Xenorhabdus poinarii and Xenorhabdus szentirmaii (97.7% each). The three isolates were almost identical in reaction towards the API and BIOLOG substrate panels but differed in their reactions from those of the established type strains of the genus Xenorhabdus. These clear genomic and metabolic differences let us propose a new species, Xenorhabdus indica sp. nov. for the three clones. The type strain is strain 28(T), DSM 17382(T), CIP 108830(T).
在从最近描述的嗜热斯氏线虫(Steinernema thermophilum)这一线虫物种中寻找新的致病杆菌属(Xenorhabdus)菌株时,通过三种独立的分离方法,从感染性幼虫的碾碎混合物中分离出了三株菌株(菌株28(T)=DSM 17382(T)、菌株42=DSM 17383和菌株43=DSM 17384)。菌株28(T)与DSM 17383的16S rRNA基因序列比较显示二者相同,并且系统发育位置表明其在致病杆菌属模式菌株的系统发育树状图中属于一个单独的分类单元。菌株28(T)最近的系统发育亲缘关系是波氏致病杆菌(Xenorhabdus poinarii)和森氏致病杆菌(Xenorhabdus szentirmaii)(均为97.7%)。这三株分离株对API和BIOLOG底物板的反应几乎相同,但与致病杆菌属已确立的模式菌株的反应不同。这些明显的基因组和代谢差异使我们为这三个克隆体提出一个新物种,即印度致病杆菌(Xenorhabdus indica sp. nov.)。模式菌株是菌株28(T),DSM 17382(T),CIP 108830(T)。