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从表面自组装到结晶:蛋白质结晶条件的预测

From surface self-assembly to crystallization: prediction of protein crystallization conditions.

作者信息

Jia Yanwei, Liu Xiang-Yang

机构信息

Department of Physics, National University of Singapore, 2 Science Drive 3, Singapore 117542.

出版信息

J Phys Chem B. 2006 Apr 6;110(13):6949-55. doi: 10.1021/jp0536089.

DOI:10.1021/jp0536089
PMID:16571007
Abstract

A new criterion based on surface and volume diffusion kinetics was established to predict protein crystallization. Similar to the layer-by-layer crystal growth process of protein, the kinetics of the two-dimensional self-assembly of protein at the aqueous solution surface provides a convenient and reliable way to estimate the surface integration and the volume transport during protein crystallization. Both the surface and diffusion kinetics were estimated based on the protein self-assembly at the air/solution interface, which can be obtained by measuring the surface tension. A crystallization coefficient is found to provide an effective and reliable criterion to predict protein crystallization conditions. This criterion has been applied to lysozyme, concanavalin A and BSA crystallization, and it turns out to be very successful and more reliable than the second virial coefficient criterion.

摘要

建立了一种基于表面和体积扩散动力学的新准则来预测蛋白质结晶。类似于蛋白质的逐层晶体生长过程,蛋白质在水溶液表面的二维自组装动力学为估算蛋白质结晶过程中的表面整合和体积传输提供了一种便捷可靠的方法。表面和扩散动力学均基于蛋白质在空气/溶液界面的自组装来估算,这可通过测量表面张力获得。发现结晶系数为预测蛋白质结晶条件提供了一种有效且可靠的准则。该准则已应用于溶菌酶、伴刀豆球蛋白A和牛血清白蛋白的结晶,结果证明非常成功,且比第二维里系数准则更可靠。

相似文献

1
From surface self-assembly to crystallization: prediction of protein crystallization conditions.从表面自组装到结晶:蛋白质结晶条件的预测
J Phys Chem B. 2006 Apr 6;110(13):6949-55. doi: 10.1021/jp0536089.
2
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Interpretation of negative second virial coefficients from non-attractive protein solution osmotic pressure data: an alternate perspective.从非吸引性蛋白质溶液渗透压数据中解读负第二维里系数:另一种观点。
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Initial evaluations of the reproducibility of vapor-diffusion crystallization.气相扩散结晶重现性的初步评估。
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Seeded isothermal batch crystallization of lysozyme.溶菌酶的接种等温间歇结晶。
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Protein-lipid interactions at the air/water interface.气/水界面处的蛋白质-脂质相互作用。
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NMR chemical shift pattern changed by ammonium sulfate precipitation in cyanobacterial phytochrome Cph1.硫酸铵沉淀导致蓝藻光敏色素 Cph1 的核磁共振化学位移图谱发生变化。
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Protein assembly at the air-water interface studied by fluorescence microscopy.利用荧光显微镜研究气-液界面处的蛋白质组装。
Langmuir. 2011 Nov 1;27(21):12775-81. doi: 10.1021/la203053g. Epub 2011 Oct 3.
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Challenges and opportunities for new protein crystallization strategies in structure-based drug design.基于结构的药物设计中新蛋白质结晶策略的挑战与机遇。
Expert Opin Drug Discov. 2010 Nov;5(11):1039-45. doi: 10.1517/17460441.2010.515583.
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On the protein crystal formation as an interface-controlled process with prototype ion-channeling effect.论蛋白质晶体形成作为一种具有原型离子通道效应的界面控制过程。
J Biol Phys. 2007 Aug;33(4):313-29. doi: 10.1007/s10867-008-9076-1. Epub 2008 May 29.
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Kinetic analysis of protein crystal nucleation in gel matrix.凝胶基质中蛋白质晶体成核的动力学分析
Biophys J. 2008 Dec 15;95(12):5931-40. doi: 10.1529/biophysj.108.135574. Epub 2008 Oct 3.
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Phosphorylation of osteopontin is required for inhibition of calcium oxalate crystallization.骨桥蛋白的磷酸化是抑制草酸钙结晶所必需的。
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