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利用社会网络分析来刻画2001年英国口蹄疫(FMD)疫情初期动物移动的模式。

Use of social network analysis to characterize the pattern of animal movements in the initial phases of the 2001 foot and mouth disease (FMD) epidemic in the UK.

作者信息

Ortiz-Pelaez A, Pfeiffer D U, Soares-Magalhães R J, Guitian F J

机构信息

Epidemiology Division, Department of Veterinary College, University of London, Hawkshead Lane, North Mymms, Hatfield, Hertfordshire AL9 7TA, UK.

出版信息

Prev Vet Med. 2006 Sep 15;76(1-2):40-55. doi: 10.1016/j.prevetmed.2006.04.007.

Abstract

Aggregated movement data do not take into account the relative position of the units within a higher-level structure. Social network analysis (SNA) and graph theory provide a tool to organise and analyse relational data overcoming the limitations of standard methods where the position of individuals/observations does not affect the result of the analysis. Some recorded movements of cattle and sheep during the initial phase of the 2001 foot and mouth disease (FMD) outbreak in the UK, before the ban on animal movements was imposed, are analysed descriptively using SNA. With the data available, a directed dichotomized network with 653 nodes and 797 arches was analysed. Most of the 10 nodes with the highest betweenness (3 farms, 4 markets and 3 dealers) were identified as key players in the initial spread of the infection. Three groups of nodes with distinctive proportion of k < or = 2 neighbours would result in three different theoretical outbreak dimensions assuming that the infection is only disseminated by the movements included in the network: no spread, spread up to 7% and around 25%. There are three hierarchical clusters with 308, 215 and 130 nodes, respectively. Farms in cluster 1 appear to be more similar in their movement patterns to non-farm holdings than to farms in clusters 2 and 3. Relative betweenness, k-neighbours and structural equivalence using hierarchical clustering were able to identify key actors in the evolution of the initial phases of the FMD outbreak such as markets, dealers and farms with atypical movement patterns. Holdings with high betweenness, large number of k < or = 2 neighbours and with movement pattern as in cluster 1 should be targeted in disease control activities once primary actors like markets, dealers and slaughter houses have been contained.

摘要

汇总的移动数据未考虑到较高级别结构中各单元的相对位置。社会网络分析(SNA)和图论提供了一种工具,用于组织和分析关系数据,克服了标准方法的局限性,在标准方法中,个体/观测值的位置不影响分析结果。利用SNA对2001年英国口蹄疫(FMD)疫情初期在动物移动禁令实施之前记录的一些牛羊移动情况进行了描述性分析。利用现有数据,分析了一个具有653个节点和797条弧的有向二分网络。中间中心性最高的10个节点中的大多数(3个农场、4个市场和3个经销商)被确定为感染初期传播的关键参与者。假设感染仅通过网络中包含的移动传播,具有不同比例k≤2个邻居的三组节点将导致三种不同的理论疫情规模:无传播、传播至7%左右和传播至25%左右。有三个层次聚类,分别包含308、215和130个节点。聚类1中的农场在移动模式上似乎与非农场经营场所比与聚类2和3中的农场更为相似。利用层次聚类的相对中间中心性、k邻居和结构等价性能够识别口蹄疫疫情初期演变中的关键参与者,如市场、经销商和具有非典型移动模式的农场。一旦市场、经销商和屠宰场等主要参与者得到控制,在疾病控制活动中应将具有高中间中心性、大量k≤2个邻居且移动模式如聚类1中的经营场所作为目标。

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