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从医学文献数据库(MEDLINE)中提取药物相互作用文章以改善药物数据库的内容。

Extracting drug-drug interaction articles from MEDLINE to improve the content of drug databases.

作者信息

Duda Stephany, Aliferis Constantin, Miller Randolph, Statnikov Alexander, Johnson Kevin

机构信息

Department of Biomedical Informatics, Vanderbilt University, Nashville, TN, USA.

出版信息

AMIA Annu Symp Proc. 2005;2005:216-20.

PMID:16779033
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1560879/
Abstract

Drug-drug interaction systems exhibit low signal-to-noise ratios because of the amount of clinically insignificant or inaccurate information they contain. MEDLINE represents a respected source of peer-reviewed biomedical citations that potentially might serve as a valuable source of drug-drug interaction information, if relevant articles could be pinpointed effectively and efficiently. We evaluated the classification capability of Support Vector Machines as a method for locating articles about drug interactions. We used a corpus of "positive" and"negative" drug interaction citations to generate datasets composed of MeSH terms, CUI-tagged title and abstract text, and stemmed text words. The study showed that automated classification techniques have the potential to perform at least as well as PubMed in identifying drug-drug interaction articles.

摘要

药物相互作用系统由于包含大量临床意义不大或不准确的信息,其信噪比很低。医学文献数据库(MEDLINE)是经过同行评审的生物医学文献的权威来源,如果能够有效且高效地找到相关文章,它有可能成为药物相互作用信息的宝贵来源。我们评估了支持向量机作为一种定位药物相互作用相关文章的方法的分类能力。我们使用了一个由“阳性”和“阴性”药物相互作用文献引用组成的语料库,来生成由医学主题词(MeSH)、带概念唯一标识符(CUI)标签的标题和摘要文本以及词干文本单词组成的数据集。研究表明,自动分类技术在识别药物相互作用文章方面至少有潜力与PubMed表现得一样好。

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Text categorization models for high-quality article retrieval in internal medicine.用于内科高质量文章检索的文本分类模型。
J Am Med Inform Assoc. 2005 Mar-Apr;12(2):207-16. doi: 10.1197/jamia.M1641. Epub 2004 Nov 23.
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Learning Boolean queries for article quality filtering.学习用于文章质量过滤的布尔查询。
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Evaluation of five full-text drug databases by pharmacy students, faculty, and librarians: do the groups agree?药学专业学生、教师和图书馆员对五个全文药物数据库的评估:各群体的意见一致吗?
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HITON: a novel Markov Blanket algorithm for optimal variable selection.希顿:一种用于最优变量选择的新型马尔可夫毯算法。
AMIA Annu Symp Proc. 2003;2003:21-5.
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Computerized physician order entry and medication errors in a pediatric critical care unit.儿科重症监护病房中的计算机化医嘱录入与用药错误
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Drug-information software for Palm operating system personal digital assistants: breadth, clinical dependability, and ease of use.适用于Palm操作系统个人数字助理的药物信息软件:涵盖范围、临床可靠性及易用性。
Pharmacotherapy. 2002 Aug;22(8):1036-40. doi: 10.1592/phco.22.12.1036.33601.
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Performance of community pharmacy drug interaction software.社区药房药物相互作用软件的性能
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