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丹麦养牛业贸易模式的网络分析,作为疾病传播风险潜力的评估。

Network analysis of Danish cattle industry trade patterns as an evaluation of risk potential for disease spread.

作者信息

Bigras-Poulin M, Thompson R A, Chriel M, Mortensen S, Greiner M

机构信息

Faculté de Médecine Vétérinaire, Université de Montréal, 3200 Sicotte, St-Hyacinthe, Que., Canada J2S 7C6.

出版信息

Prev Vet Med. 2006 Sep 15;76(1-2):11-39. doi: 10.1016/j.prevetmed.2006.04.004. Epub 2006 Jun 14.

Abstract

Trade patterns of animal movements in a specific industry are complex and difficult to study because there are many stakeholders, premises that are heterogeneously spread over the country, and a highly dynamic flow of animals exists among them. The Danish cattle industry was defined as a network of animal movements and graph theory was used to analyse the movements of cattle within this network. A premise was defined as a farm, an abattoir or a market. These premises constituted the network nodes in the graph and the animal movements between them were the links. In this framework, each premise had a sub-network of other premises to which it was linked by these animal movements. If no movement of animals were registered for a specific farm, then the sub-network for that premise consisted of only that premise. Otherwise, the sub-network linked the premise of interest to all premises from which and to which animals were moved, as long as there was a path linking animal movements to that specific premise. This approach allowed visualization and analyses of four levels of organization that existed in Denmark animal registers: (1) the animal that was moved, (2) the movements of all animals between two premises, (3) the specific premise network, and (4) the overall industry network. When contagious animals are moved from one premise to another, then to a third and so forth, these movements create a path for potential transfer of pathogens. The paths within which pathogens are present identify the transmission risks. A network of animal movements should provide information about pathogen transmission and disease spread. The network of the Danish cattle industry network was a directed scale-free graph (the direction of a movement was known), with an in-degree power of 2 an out-degree power of 1.46, consisted of 29,999 nodes, and 130,265 movements during a 6-month period. The in clustering coefficient was calculated to be 0.52 for the inward direction (movement to), while it was 0.02 for the outward direction (movement from). In Denmark, the cattle movements between premises demonstrated a large degree of heterogeneity. This heterogeneity in movements between farms should be used to evaluate the risk potential of disease transmission for each premise and must be considered when modelling disease spread between premises. The objective of this research was to describe the network of animal movements and not just the animal movements per se.

摘要

特定行业中动物流动的贸易模式复杂且难以研究,因为利益相关者众多,养殖场在全国分布不均,且动物在其间的流动极为动态。丹麦养牛业被定义为一个动物流动网络,运用图论来分析该网络内牛的流动情况。一个场所被定义为一个农场、一个屠宰场或一个市场。这些场所构成了图中的网络节点,它们之间的动物流动则为链路。在此框架下,每个场所都有一个由其他场所构成的子网,通过这些动物流动与之相连。如果某个特定农场没有动物流动记录,那么该场所的子网仅由该场所自身构成。否则,子网会将相关场所与所有有动物流入和流出的场所相连,只要存在一条将动物流动与该特定场所相连的路径。这种方法能够对丹麦动物登记册中存在的四个组织层次进行可视化和分析:(1)被转移的动物;(2)两个场所之间所有动物的流动;(3)特定场所网络;(4)整个行业网络。当感染性动物从一个场所转移到另一个场所,再转移到第三个场所等等时,这些流动为病原体的潜在传播创造了一条路径。存在病原体的路径确定了传播风险。动物流动网络应提供有关病原体传播和疾病扩散的信息。丹麦养牛业网络是一个有向无标度图(流动方向已知),入度幂为2,出度幂为1.46,由29,999个节点组成,在6个月期间有130,265次流动。向内方向(流入)的集聚系数经计算为0.52,而向外方向(流出)的集聚系数为0.02。在丹麦,场所之间的牛流动表现出很大程度的异质性。养殖场之间流动的这种异质性应用于评估每个场所疾病传播的潜在风险,并且在对场所之间的疾病传播进行建模时必须予以考虑。本研究的目的是描述动物流动网络,而不仅仅是动物流动本身。

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