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嗜压适应:从基因组角度看

Piezophilic adaptation: a genomic point of view.

作者信息

Simonato Francesca, Campanaro Stefano, Lauro Federico M, Vezzi Alessandro, D'Angelo Michela, Vitulo Nicola, Valle Giorgio, Bartlett Douglas H

机构信息

Department of Biology, Università di Padova, via Ugo Bassi 58/B, 35131 Padova, Italy.

出版信息

J Biotechnol. 2006 Oct 20;126(1):11-25. doi: 10.1016/j.jbiotec.2006.03.038. Epub 2006 Jun 14.

Abstract

Two-thirds of Earth's surface is covered by oceans, yet the study of this massive integrated living system is still in its infancy. Various environmental variables, such as high salinity, low and changeable nutrient availability and depth-correlated gradients of light, temperature, nutrients and pressure shape the diversity, physiology and ecology of marine species. As oceans present an average depth of 3800 m, deep-sea ecosystems represent the most common marine ecological niche. One of the key environment variables that influences the life and evolution of deep-sea organisms is high pressure. This extreme widespread condition requires specific adaptations, the nature of which remains largely unknown. Recent advances in genomic approaches, such as in sequencing technologies and global expression profiling, are rapidly increasing the data available to understand microbial evolution, biochemistry, physiology and diversity. This review summarises the analysis of the results published so far about microbial high pressure adaptation from a genomic point of view. Understanding high pressure adaptation mechanisms is not just a scientific exercise but has important biotechnological implications. For example, hydrostatic pressure is a reality for food science and technology, both for food preparation and preservation. An understanding of the effects of pressure on biomolecules will expand its use in the medical, industrial and biotechnological fields.

摘要

地球表面三分之二被海洋覆盖,但对这个庞大的综合生命系统的研究仍处于起步阶段。各种环境变量,如高盐度、低且多变的养分可用性以及与深度相关的光照、温度、养分和压力梯度,塑造了海洋物种的多样性、生理学和生态学。由于海洋平均深度为3800米,深海生态系统是最常见的海洋生态位。影响深海生物生命和进化的关键环境变量之一是高压。这种极端普遍的条件需要特定的适应性,而其本质在很大程度上仍然未知。基因组方法的最新进展,如测序技术和全局表达谱分析,正在迅速增加可用于理解微生物进化、生物化学、生理学和多样性的数据。本综述从基因组角度总结了迄今为止发表的关于微生物高压适应性结果的分析。了解高压适应机制不仅是一项科学活动,而且具有重要的生物技术意义。例如,静水压力在食品科学和技术中是现实存在的,无论是在食品制备还是保存方面。了解压力对生物分子的影响将扩大其在医学、工业和生物技术领域的应用。

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