Puttonen Eetu, Tossavainen Helena, Permi Perttu
NMR Laboratory, Program in Structural Biology and Biophysics, Institute of Biotechnology, P.O. Box 65, FI-00014, University of Helsinki, Helsinki, Finland.
Magn Reson Chem. 2006 Jul;44 Spec No:S168-76. doi: 10.1002/mrc.1836.
Four simple and sensitive HNCO-based methods for measurement of 1J(C'Calpha), 1J(NCalpha) and 2J(NCalpha) coupling constants in protein main chains are presented. Three of these experiments enable the simultaneous measurement of 1J(C'Calpha), 1J(NCalpha) and 2J(NCalpha) couplings. Exploitation of the E.COSY principle provides excellent dispersion of cross peaks in the resulting 3D spectra. The couplings can be retrieved with good accuracy from peak-to-peak separations. Karplus parameterizations are provided for 1J(NCalpha) and 2J(NCalpha), obtained from a nearly complete set of couplings of human ubiquitin. In addition, feasibility of the proposed methodology for measuring several residual dipolar couplings (RDCs) simultaneously is assessed.
本文介绍了四种基于HNCO的简单且灵敏的方法,用于测量蛋白质主链中的1J(C'Calpha)、1J(NCalpha)和2J(NCalpha)耦合常数。其中三个实验能够同时测量1J(C'Calpha)、1J(NCalpha)和2J(NCalpha)耦合。利用E.COSY原理可在所得的三维谱图中实现交叉峰的良好分散。通过峰间距可高精度地获取耦合常数。给出了从人泛素几乎完整的耦合常数集得到的1J(NCalpha)和2J(NCalpha)的Karplus参数化。此外,还评估了所提出的同时测量多个剩余偶极耦合(RDC)方法的可行性。