Cao Sen-Yang, Wu Xiao-Bing, Yan Peng, Hu Yu-Ling, Su Xia, Jiang Zhi-Gang
Life Science College of Anhui Normal University and Anhui Province Key Laboratory for Conservation and Exploitation of Biological Resource, Wuhu 241000, PR China.
Mitochondrion. 2006 Aug;6(4):186-93. doi: 10.1016/j.mito.2006.07.003. Epub 2006 Jul 21.
The complete mitochondrial genome of Bufo gargarizans was sequenced using overlapping polymerase chain reaction (PCR) amplicons (GenBank Accession No. DQ275350). The genome is 17,277 base pairs in length, containing 13 protein-coding genes (ATP6, ATP8, COI-III, ND1-6, ND4L, Cyt b), 2 ribosomal RNAs (12S rRNA and 16S rRNA), 22 transfer RNAs and a putative control region. We analyzed the sequence using bioinformatics methods comparing the obtained mtDNA sequence with other toads and frogs. Based on the concatenated nucleotide sequences of protein-coding genes, we constructed a phylogenetic tree with maximum likelihood (ML) and maximum parsimony (MP) methods and discussed the phylogenetic relationships among 11 species of Anura.
利用重叠聚合酶链反应(PCR)扩增子对中华大蟾蜍的完整线粒体基因组进行了测序(GenBank登录号:DQ275350)。该基因组长度为17277个碱基对,包含13个蛋白质编码基因(ATP6、ATP8、COI - III、ND1 - 6、ND4L、Cyt b)、2个核糖体RNA(12S rRNA和16S rRNA)、22个转运RNA和一个假定的控制区。我们使用生物信息学方法对该序列进行了分析,将获得的线粒体DNA序列与其他蟾蜍和青蛙进行了比较。基于蛋白质编码基因的串联核苷酸序列,我们用最大似然法(ML)和最大简约法(MP)构建了系统发育树,并讨论了无尾目11个物种之间的系统发育关系。