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本文引用的文献

1
Properties of succinyl-coenzyme A:L-malate coenzyme A transferase and its role in the autotrophic 3-hydroxypropionate cycle of Chloroflexus aurantiacus.琥珀酰辅酶A:L-苹果酸辅酶A转移酶的特性及其在嗜热栖热菌自养3-羟基丙酸循环中的作用。
J Bacteriol. 2006 Apr;188(7):2646-55. doi: 10.1128/JB.188.7.2646-2655.2006.
2
Crystal structure of Escherichia coli crotonobetainyl-CoA: carnitine CoA-transferase (CaiB) and its complexes with CoA and carnitinyl-CoA.大肠杆菌巴豆甜菜碱辅酶A:肉碱辅酶A转移酶(CaiB)及其与辅酶A和肉碱辅酶A复合物的晶体结构。
Biochemistry. 2005 Apr 19;44(15):5728-38. doi: 10.1021/bi047656f.
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Crystal structure of CaiB, a type-III CoA transferase in carnitine metabolism.肉碱代谢中III型辅酶A转移酶CaiB的晶体结构。
Biochemistry. 2004 Nov 9;43(44):13996-4003. doi: 10.1021/bi048481c.
4
Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes.产甲酸草酸杆菌中甲酰辅酶A转移酶的动力学及机制特性
J Biol Chem. 2004 Aug 20;279(34):36003-12. doi: 10.1074/jbc.M404873200. Epub 2004 Jun 21.
5
Structure of Escherichia coli YfdW, a type III CoA transferase.大肠杆菌YfdW(一种III型辅酶A转移酶)的结构
Acta Crystallogr D Biol Crystallogr. 2004 Mar;60(Pt 3):507-11. doi: 10.1107/S0907444904000034. Epub 2004 Feb 25.
6
The crystal structure of the Escherichia coli YfdW gene product reveals a new fold of two interlaced rings identifying a wide family of CoA transferases.大肠杆菌YfdW基因产物的晶体结构揭示了一种由两个交错环组成的新折叠结构,确定了一个广泛的辅酶A转移酶家族。
J Biol Chem. 2003 Sep 5;278(36):34582-6. doi: 10.1074/jbc.C300282200. Epub 2003 Jul 3.
7
Formyl-CoA transferase encloses the CoA binding site at the interface of an interlocked dimer.甲酰辅酶A转移酶在互锁二聚体的界面处包围辅酶A结合位点。
EMBO J. 2003 Jul 1;22(13):3210-9. doi: 10.1093/emboj/cdg333.
8
L-Malyl-coenzyme A lyase/beta-methylmalyl-coenzyme A lyase from Chloroflexus aurantiacus, a bifunctional enzyme involved in autotrophic CO(2) fixation.来自橙色绿屈挠菌的L-苹果酰辅酶A裂合酶/β-甲基苹果酰辅酶A裂合酶,一种参与自养二氧化碳固定的双功能酶。
J Bacteriol. 2002 Nov;184(21):5999-6006. doi: 10.1128/JB.184.21.5999-6006.2002.
9
Malonyl-coenzyme A reductase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO(2) fixation.来自嗜热栖热放线菌的丙二酰辅酶A还原酶,是自养二氧化碳固定的3-羟基丙酸循环的关键酶。
J Bacteriol. 2002 May;184(9):2404-10. doi: 10.1128/JB.184.9.2404-2410.2002.
10
A bicyclic autotrophic CO2 fixation pathway in Chloroflexus aurantiacus.嗜热栖热菌中的双环自养二氧化碳固定途径。
J Biol Chem. 2002 Jun 7;277(23):20277-83. doi: 10.1074/jbc.M201030200. Epub 2002 Apr 2.

琥珀酰辅酶A:D-柠苹酸辅酶A转移酶的特性及其在嗜热栖热放线菌自养3-羟基丙酸循环中的作用。

Properties of succinyl-coenzyme A:D-citramalate coenzyme A transferase and its role in the autotrophic 3-hydroxypropionate cycle of Chloroflexus aurantiacus.

作者信息

Friedmann Silke, Alber Birgit E, Fuchs Georg

机构信息

Mikrobiologie, Institut Biologie II, Schänzlestr. 1, D-79104 Freiburg, Germany.

出版信息

J Bacteriol. 2006 Sep;188(18):6460-8. doi: 10.1128/JB.00659-06.

DOI:10.1128/JB.00659-06
PMID:16952935
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1595468/
Abstract

The phototrophic bacterium Chloroflexus aurantiacus uses the 3-hydroxypropionate cycle for autotrophic CO(2) fixation. This cycle starts with acetyl-coenzyme A (CoA) and produces glyoxylate. Glyoxylate is an unconventional cell carbon precursor that needs special enzymes for assimilation. Glyoxylate is combined with propionyl-CoA to beta-methylmalyl-CoA, which is converted to citramalate. Cell extracts catalyzed the succinyl-CoA-dependent conversion of citramalate to acetyl-CoA and pyruvate, the central cell carbon precursor. This reaction is due to the combined action of enzymes that were upregulated during autotrophic growth, a coenzyme A transferase with the use of succinyl-CoA as the CoA donor and a lyase cleaving citramalyl-CoA to acetyl-CoA and pyruvate. Genomic analysis identified a gene coding for a putative coenzyme A transferase. The gene was heterologously expressed in Escherichia coli and shown to code for succinyl-CoA:d-citramalate coenzyme A transferase. This enzyme, which catalyzes the reaction d-citramalate + succinyl-CoA --> d-citramalyl-CoA + succinate, was purified and studied. It belongs to class III of the coenzyme A transferase enzyme family, with an aspartate residue in the active site. The homodimeric enzyme composed of 44-kDa subunits was specific for succinyl-CoA as a CoA donor but also accepted d-malate and itaconate instead of d-citramalate. The CoA transferase gene is part of a cluster of genes which are cotranscribed, including the gene for d-citramalyl-CoA lyase. It is proposed that the CoA transferase and the lyase catalyze the last two steps in the glyoxylate assimilation route.

摘要

光合细菌橙色绿屈挠菌利用3-羟基丙酸循环进行自养二氧化碳固定。该循环以乙酰辅酶A(CoA)开始并产生乙醛酸。乙醛酸是一种非常规的细胞碳前体,需要特殊的酶来进行同化。乙醛酸与丙酰辅酶A结合形成β-甲基苹果酰辅酶A,后者再转化为柠苹酸。细胞提取物催化了柠苹酸依赖琥珀酰辅酶A转化为乙酰辅酶A和丙酮酸,丙酮酸是细胞的中心碳前体。该反应是由于自养生长过程中上调的酶的联合作用,一种以琥珀酰辅酶A作为CoA供体的辅酶A转移酶和一种将柠苹酰辅酶A裂解为乙酰辅酶A和丙酮酸的裂解酶。基因组分析鉴定出一个编码假定辅酶A转移酶的基因。该基因在大肠杆菌中进行了异源表达,并显示编码琥珀酰辅酶A:d-柠苹酸辅酶A转移酶。这种催化反应d-柠苹酸 + 琥珀酰辅酶A --> d-柠苹酰辅酶A + 琥珀酸的酶被纯化并进行了研究。它属于辅酶A转移酶家族的III类,活性位点有一个天冬氨酸残基。由44 kDa亚基组成的同二聚体酶对琥珀酰辅酶A作为CoA供体具有特异性,但也接受d-苹果酸和衣康酸而非d-柠苹酸。辅酶A转移酶基因是一组共转录基因簇的一部分,包括d-柠苹酰辅酶A裂解酶的基因。有人提出辅酶A转移酶和裂解酶催化乙醛酸同化途径的最后两步。