NMPP：一种用户定制的NimbleGen微阵列数据处理流程。
NMPP: a user-customized NimbleGen microarray data processing pipeline.
作者信息
Wang Xiangfeng, He Hang, Li Lei, Chen Runsheng, Deng Xing Wang, Li Songgang
机构信息
Center of Bioinformatics & Peking-Yale Joint Research Center of Plant Molecular Genetics and Agrobiotechnology, College of Life Sciences, Peking University, Beijing 100871, China.
出版信息
Bioinformatics. 2006 Dec 1;22(23):2955-7. doi: 10.1093/bioinformatics/btl525. Epub 2006 Oct 12.
UNLABELLED
NMPP package is a bundle of user-customized tools based on established algorithms and methods to process self-designed NimbleGen microarray data. It features a command-line-based integrative processing procedure that comprises five major functional components, namely the raw microarray data parsing and integrating module, the array spatial effect smoothing and visualization module, the probe-level multi-array normalization module, the gene expression intensity summarization module and the gene expression status inference module.
AVAILABILITY
未标注
NMPP软件包是一组基于既定算法和方法的用户定制工具，用于处理自行设计的NimbleGen微阵列数据。它具有基于命令行的综合处理程序，包括五个主要功能组件，即原始微阵列数据解析与整合模块、阵列空间效应平滑与可视化模块、探针级多阵列归一化模块、基因表达强度汇总模块和基因表达状态推断模块。
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