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来自金鱼草的转座元件Tam1与玉米转座子En/Spm具有结构同源性,且没有插入序列特异性。

The transposable element Tam1 from Antirrhinum majus shows structural homology to the maize transposon En/Spm and has no sequence specificity of insertion.

作者信息

Nacken W K, Piotrowiak R, Saedler H, Sommer H

机构信息

Max-Planck-Institut für Züchtigungsforschung, Köln, FRG.

出版信息

Mol Gen Genet. 1991 Aug;228(1-2):201-8. doi: 10.1007/BF00282466.

Abstract

We present the genomic structure of Tam1, a transposable element from Antirrhinum majus. The Tam1 element is 15.2 kb long and includes two genes that are transcribed to produce a 2.4 kb (tnp1) and a 5 kb mRNA (tnp2). These transcripts partially overlap and the exons are scattered over the whole element. Tnp1 encodes a 53 kDa protein as deduced from the cDNA sequence. The 5 kb transcript of tnp2 contains an open reading frame that shares 45% homology with part of the tnpD gene of En/Spm from maize and 48% homology with an open reading frame of the Tgm element from Glycine max. We discuss the possible functions of these genes by analogy with En/Spm. Additionally, a number of flanking sequences of Tam1 insertions were analysed to investigate the sequence specificity of insertion. From these studies we conclude that Tam1 transposes predominantly into AT-rich regions that can be unique as well as repetitive. No specific target sequence of insertion could be found.

摘要

我们展示了来自金鱼草的转座元件Tam1的基因组结构。Tam1元件长15.2 kb,包含两个基因,转录后产生一个2.4 kb的mRNA(tnp1)和一个5 kb的mRNA(tnp2)。这些转录本部分重叠,外显子分散在整个元件上。根据cDNA序列推断,Tnp1编码一种53 kDa的蛋白质。tnp2的5 kb转录本包含一个开放阅读框,与玉米En/Spm的tnpD基因部分具有45%的同源性,与大豆Tgm元件的一个开放阅读框具有48%的同源性。我们通过与En/Spm类比讨论了这些基因的可能功能。此外,分析了Tam1插入的一些侧翼序列,以研究插入的序列特异性。从这些研究中我们得出结论,Tam1主要转座到富含AT的区域,这些区域可以是独特的,也可以是重复的。未发现特定的插入靶序列。

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