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[嗜碱地杆菌新属新种,即从苏打湖分离得到的地杆菌科首个嗜碱代表菌]

[Geoalkalibacter ferrihydriticus gen. nov., sp. nov., the first alkaliphilic representative of the family Geobacteraceae, isolated from a soda lake].

作者信息

Zavarzina D G, Kolganova T V, Bulygina E S, Kostrikina N A, Turova T P, Zavarzin G A

出版信息

Mikrobiologiia. 2006 Nov-Dec;75(6):775-85.

Abstract

Investigation of iron reduction in bottom sediments of alkaline soda lakes resulted in the isolation of a new obligately anaerobic iron-reducing bacterium, strain Z-0531, from Lake Khadyn (Tuva Republic, Russia) sediment samples. The cells of strain Z-0531 are short (1.0-1.5 by 0.3-0.5 microm), motile, non-spore-forming, gram-negative rods. The isolate is an obligate alkaliphile, developing in the pH range of 7.8-10.0, with an optimum at pH 8.6. It does not require NaCl but grows at NaCl concentrations of 0-50 g/1l. It can oxidize acetate with such electron acceptors as amorphous Fe(llI) hydroxide (AFH), EDTA-Fe(III), anthraquinone-2,6-disulfonate (quinone), Mn(IV), and S(0). On media with EDTA-Fe(III), the isolate can oxidize, apart from acetate, ethanol, pyruvate, oxalate, arginine, tartrate, lactate, propionate, and serine. H2 is not utilized. The reduced products formed during growth with AFH are siderite or magnetite, depending on the growth conditions. The isolate is incapable of fermenting sugars, peptides, and amino acids. Yeast extract or vitamins are required as growth factors. The organism is capable of dinitrogen fixation and harbors the nifH gene. The DNA G+C content is 55.3 mol %. 16S rRNA analysis places strain Z-0531 into the family Geobacteraceae. Its closest relative (93% similarity) is Desulfuromonas palmitatis. Based on phenotypic distinctions and phylogenetic position, it is proposed that strain Z-0531 be assigned to the new genus and species Geoalkalibacter ferrihydriticus gen. nov., sp. nov.

摘要

对碱性苏打湖底部沉积物中铁还原情况的调查,从哈迪恩湖(俄罗斯图瓦共和国)的沉积物样本中分离出一种新的专性厌氧铁还原细菌,菌株Z - 0531。菌株Z - 0531的细胞短(1.0 - 1.5×0.3 - 0.5微米),具运动性,不形成芽孢,革兰氏阴性杆菌。该分离株是专性嗜碱菌,在pH 7.8 - 10.0范围内生长,最适pH为8.6。它不需要氯化钠,但能在0 - 50 g/1l的氯化钠浓度下生长。它可以用诸如无定形氢氧化铁(AFH)、乙二胺四乙酸铁(III)、蒽醌 - 2,6 - 二磺酸盐(醌)、锰(IV)和硫(0)等电子受体氧化乙酸盐。在含有乙二胺四乙酸铁(III)的培养基上,该分离株除了能氧化乙酸盐外,还能氧化乙醇、丙酮酸、草酸盐、精氨酸、酒石酸盐、乳酸盐、丙酸盐和丝氨酸。不利用氢气。在以AFH为电子受体生长过程中形成的还原产物是菱铁矿或磁铁矿,这取决于生长条件。该分离株不能发酵糖类、肽类和氨基酸。需要酵母提取物或维生素作为生长因子。该生物体能够固氮并含有nifH基因。DNA的G + C含量为55.3摩尔%。16S rRNA分析将菌株Z - 0531归入地杆菌科。其最接近的亲缘种(相似度93%)是棕榈酸脱硫单胞菌。基于表型差异和系统发育位置,建议将菌株Z - 0531归入新属新种水铁矿地嗜碱杆菌(Geoalkalibacter ferrihydriticus),新属,新种。

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