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[利用分子标记技术分析不同生态型芦苇(Phragmites communis Trin.)的遗传多样性]

[An analysis of genetic diversity of different ecotypes of reed (Phragmites communis Trin.) by molecular marker techniques].

作者信息

Lin Wen-Fang, Chen Lin-Jiao, Zhu Xue-Yi

机构信息

School of Life Sciences, Xiamen University, Xiamen 361005, China.

出版信息

Zhi Wu Sheng Li Yu Fen Zi Sheng Wu Xue Xue Bao. 2007 Feb;33(1):77-84.

Abstract

ISSR (inter-simple sequence repeat) and RAPD (random-amplified polymorphic DNA) markers were used to detect genetic diversity of 4 different ecotypes of reed (Phragmites communis Trin.) growing in Hexi Corridor, Gansu province. Nine effective primers were screened from 30 ISSR arbitrary primers, and a total of 99 DNA bands were amplified, among which 51 (51.5%) were polymorphic. Thirteen effective primers were screened from 45 RAPD 10-oligonucleotide arbitrary primers, and a total of 195 DNA bands were amplified, among which 87 (44.6%) were polymorphic. Genetic identity based on ISSR and RAPD data showed a positive correlation (r=0.845, P<0.05). Based on unweighted pair-group method with arithmetic averages (UPGMA) cluster analysis on DNA bands amplified, together with the correlation analysis between genetic distance and soil water contents and soluble salt contents as well, the present results suggest that the genetic diversity occurs among the four ecotypes of reed in adaptation to long term natural drought and salinity, showing an obvious evolutional tendency from swamp reed via salt meadow reed to dune reed.

摘要

利用简单序列重复区间(ISSR)和随机扩增多态性DNA(RAPD)标记检测了甘肃省河西走廊生长的4种不同生态型芦苇(Phragmites communis Trin.)的遗传多样性。从30条ISSR随机引物中筛选出9条有效引物,共扩增出99条DNA条带,其中51条(51.5%)具有多态性。从45条RAPD 10核苷酸随机引物中筛选出13条有效引物,共扩增出195条DNA条带,其中87条(44.6%)具有多态性。基于ISSR和RAPD数据的遗传一致性呈正相关(r=0.845,P<0.05)。基于对扩增出的DNA条带进行非加权组平均法(UPGMA)聚类分析,以及遗传距离与土壤含水量和可溶性盐含量之间的相关性分析,结果表明,4种生态型芦苇在适应长期自然干旱和盐渍化过程中存在遗传多样性,呈现出从沼泽芦苇经盐化草甸芦苇到沙丘芦苇的明显进化趋势。

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