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新种威廉姆斯菌(Williamsia serinedens),从受油污染的土壤中分离得到。

Williamsia serinedens sp. nov., isolated from an oil-contaminated soil.

作者信息

Yassin A F, Young Chiu Chung, Lai Wei-An, Hupfer H, Arun A B, Shen Fo-Ting, Rekha P D, Ho Mann-Jing

机构信息

Institut für Medizinische Mikrobiologie und Immunologie der Universität Bonn, 53127 Bonn, Germany.

College of Agriculture and Natural Resources, Department of Soil & Environmental Sciences, National Chung Hsing University, Taichung 402, Taiwan, ROC.

出版信息

Int J Syst Evol Microbiol. 2007 Mar;57(Pt 3):558-561. doi: 10.1099/ijs.0.64691-0.

Abstract

The taxonomic status of a bacterium designated strain IMMIB SR-4(T) isolated from an oil-contaminated soil sample was characterized by using a polyphasic approach. Chemotaxonomic investigations revealed the presence of cell-wall chemotype IV, short-chain mycolic acids that co-migrated with those extracted from members of the genus Williamsia and that on pyrolysis GC produce C(16 : 0) and C(18 : 0) fatty acids, and dihydrogenated menaquinone with nine isoprene units as the predominant menaquinone. The generic assignment was confirmed by 16S rRNA gene sequence analysis. Comparative analysis of the 16S rRNA gene sequence showed that strain IMMIB SR-4(T) formed a distinct phyletic line within the genus Williamsia, displaying sequence similarities of 95.5-98.1 % with the type strains of recognized Williamsia species. Strain IMMIB SR-4(T) was distinguished from the type strains of recognized species of the genus Williamsia based on a set of phenotypic features. The genotypic and phenotypic data indicated that strain IMMIB SR-4(T) represents a novel species of the genus Williamsia, for which the name Williamsia serinedens sp. nov. is proposed. The type strain is IMMIB SR-4(T) (=DSM 45037(T)=CCUG 53151(T)).

摘要

采用多相分类方法对从石油污染土壤样品中分离得到的一株细菌IMMIB SR-4(T)的分类地位进行了表征。化学分类学研究表明,该菌株存在细胞壁化学型IV、与从Williamsia属成员中提取的短链分枝菌酸共迁移且热解气相色谱分析产生C(16 : 0)和C(18 : 0)脂肪酸的短链分枝菌酸,以及以具有9个异戊二烯单元的二氢甲萘醌作为主要甲萘醌。通过16S rRNA基因序列分析证实了其属的归属。16S rRNA基因序列的比较分析表明,菌株IMMIB SR-4(T)在Williamsia属内形成了一个独特的系统发育分支,与已确认的Williamsia属物种的模式菌株显示出95.5 - 98.1%的序列相似性。基于一系列表型特征,菌株IMMIB SR-4(T)与已确认的Williamsia属物种的模式菌株有所区别。基因型和表型数据表明,菌株IMMIB SR-4(T)代表Williamsia属的一个新物种,为此提出了新名称Williamsia serinedens sp. nov.。模式菌株为IMMIB SR-4(T) (=DSM 45037(T)=CCUG 53151(T))。

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