• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

钾离子通道中选择性离子结合的结构和热力学性质

Structural and thermodynamic properties of selective ion binding in a K+ channel.

作者信息

Lockless Steve W, Zhou Ming, MacKinnon Roderick

机构信息

Laboratory of Molecular Neurobiology and Biophysics, The Rockefeller University, New York, New York, United States of America.

出版信息

PLoS Biol. 2007 May;5(5):e121. doi: 10.1371/journal.pbio.0050121.

DOI:10.1371/journal.pbio.0050121
PMID:17472437
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1858713/
Abstract

Thermodynamic measurements of ion binding to the Streptomyces lividans K(+) channel were carried out using isothermal titration calorimetry, whereas atomic structures of ion-bound and ion-free conformations of the channel were characterized by x-ray crystallography. Here we use these assays to show that the ion radius dependence of selectivity stems from the channel's recognition of ion size (i.e., volume) rather than charge density. Ion size recognition is a function of the channel's ability to adopt a very specific conductive structure with larger ions (K(+), Rb(+), Cs(+), and Ba(2+)) bound and not with smaller ions (Na(+), Mg(2+), and Ca(2+)). The formation of the conductive structure involves selectivity filter atoms that are in direct contact with bound ions as well as protein atoms surrounding the selectivity filter up to a distance of 15 A from the ions. We conclude that ion selectivity in a K(+) channel is a property of size-matched ion binding sites created by the protein structure.

摘要

利用等温滴定量热法对离子与变铅青链霉菌钾通道的结合进行了热力学测量,而通道的离子结合和离子自由构象的原子结构则通过X射线晶体学进行了表征。在此,我们运用这些分析方法来表明,选择性的离子半径依赖性源于通道对离子大小(即体积)而非电荷密度的识别。离子大小识别是通道采用一种非常特殊的传导结构的能力的函数,这种结构在结合较大离子(K⁺、Rb⁺、Cs⁺和Ba²⁺)时存在,而结合较小离子(Na⁺、Mg²⁺和Ca²⁺)时不存在。传导结构的形成涉及与结合离子直接接触的选择性过滤器原子以及距离离子达15埃的围绕选择性过滤器的蛋白质原子。我们得出结论,钾通道中的离子选择性是由蛋白质结构产生的大小匹配离子结合位点的一种特性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/c1b71285d1e3/pbio.0050121.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/7a7606539abd/pbio.0050121.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/2c7509d121a5/pbio.0050121.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/26d1ab6a0616/pbio.0050121.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/8f0ef3f453c3/pbio.0050121.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/deca8199cbd4/pbio.0050121.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/b7cd3a5b4cb4/pbio.0050121.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/c1b71285d1e3/pbio.0050121.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/7a7606539abd/pbio.0050121.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/2c7509d121a5/pbio.0050121.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/26d1ab6a0616/pbio.0050121.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/8f0ef3f453c3/pbio.0050121.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/deca8199cbd4/pbio.0050121.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/b7cd3a5b4cb4/pbio.0050121.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/735f/1868057/c1b71285d1e3/pbio.0050121.g007.jpg

相似文献

1
Structural and thermodynamic properties of selective ion binding in a K+ channel.钾离子通道中选择性离子结合的结构和热力学性质
PLoS Biol. 2007 May;5(5):e121. doi: 10.1371/journal.pbio.0050121.
2
Structure, function, and ion-binding properties of a K channel stabilized in the 2,4-ion-bound configuration.一种钾通道在 2,4-离子结合构象下稳定的结构、功能和离子结合特性。
Proc Natl Acad Sci U S A. 2019 Aug 20;116(34):16829-16834. doi: 10.1073/pnas.1901888116. Epub 2019 Aug 6.
3
Accessibility of Cations to the Selectivity Filter of KcsA in the Inactivated State: An Equilibrium Binding Study.失活态 KcsA 选择性过滤器中阳离子的可及性:平衡结合研究。
Int J Mol Sci. 2019 Feb 5;20(3):689. doi: 10.3390/ijms20030689.
4
Differential binding of monovalent cations to KcsA: Deciphering the mechanisms of potassium channel selectivity.单价阳离子与 KcsA 的差异结合:解析钾通道选择性的机制。
Biochim Biophys Acta Biomembr. 2017 May;1859(5):779-788. doi: 10.1016/j.bbamem.2017.01.014. Epub 2017 Jan 12.
5
Mechanism of potassium-channel selectivity revealed by Na(+) and Li(+) binding sites within the KcsA pore.KcsA孔道内Na(+)和Li(+)结合位点揭示钾通道选择性机制。
Nat Struct Mol Biol. 2009 Dec;16(12):1317-24. doi: 10.1038/nsmb.1703. Epub 2009 Nov 29.
6
Selective exclusion and selective binding both contribute to ion selectivity in KcsA, a model potassium channel.在典型的钾通道KcsA中,选择性排斥和选择性结合都对离子选择性有贡献。
J Biol Chem. 2017 Sep 15;292(37):15552-15560. doi: 10.1074/jbc.M117.795807. Epub 2017 Aug 4.
7
Ion binding to KcsA: implications in ion selectivity and channel gating.离子与 KcsA 的结合:对离子选择性和通道门控的影响。
Biochemistry. 2010 Nov 9;49(44):9480-7. doi: 10.1021/bi101235v.
8
Structural mechanism of C-type inactivation in K(+) channels.钾离子通道 C 型失活的结构机制。
Nature. 2010 Jul 8;466(7303):203-8. doi: 10.1038/nature09153.
9
Molecular determinants of gating at the potassium-channel selectivity filter.钾通道选择性过滤器门控的分子决定因素。
Nat Struct Mol Biol. 2006 Apr;13(4):311-8. doi: 10.1038/nsmb1069. Epub 2006 Mar 12.
10
Conformational dynamics in the selectivity filter of KcsA in response to potassium ion concentration.KcsA 选择性过滤器构象动力学对钾离子浓度的响应。
J Mol Biol. 2010 Aug 13;401(2):155-66. doi: 10.1016/j.jmb.2010.06.031. Epub 2010 Jun 19.

引用本文的文献

1
Optimizing Silk Nanoparticle Assembly with Potassium Ions: Effects on Physicochemical Properties and Encapsulation Efficiency.利用钾离子优化丝素纳米颗粒组装:对物理化学性质和包封效率的影响
ACS Appl Bio Mater. 2025 Aug 18;8(8):6854-6864. doi: 10.1021/acsabm.5c00598. Epub 2025 Aug 7.
2
Evaluating the impact of bioinspired counterion inclusion on silk nanoparticle physicochemical attributes and physical stability.评估仿生抗衡离子包封对丝纳米颗粒物理化学性质和物理稳定性的影响。
Nanoscale Adv. 2025 Jul 21. doi: 10.1039/d5na00365b.
3
Direct visualization of electric-field-stimulated ion conduction in a potassium channel.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Additions and corrections: host-guest complexation. 38. Cryptahemispherands and their complexes.
J Am Chem Soc. 1986 Sep 1;108(19):6100. doi: 10.1021/ja00279a607.
3
Ion selectivity in a semisynthetic K+ channel locked in the conductive conformation.锁定在导电构象的半合成钾通道中的离子选择性
Science. 2006 Nov 10;314(5801):1004-7. doi: 10.1126/science.1133415.
钾通道中电场刺激离子传导的直接可视化
Cell. 2025 Jan 9;188(1):77-88.e15. doi: 10.1016/j.cell.2024.12.006.
4
Elucidating the role of lipid interactions in stabilizing the membrane protein KcsA.阐明脂质相互作用在稳定膜蛋白 KcsA 中的作用。
Biophys J. 2024 Sep 17;123(18):3205-3216. doi: 10.1016/j.bpj.2024.07.019. Epub 2024 Jul 18.
5
Conformational Dynamic Studies of Prokaryotic Potassium Channels Explored by Homo-FRET Methodologies.原核钾通道构象动力学研究的同型荧光共振能量转移方法探索。
Methods Mol Biol. 2024;2796:35-72. doi: 10.1007/978-1-0716-3818-7_3.
6
Non-ionotropic voltage-gated calcium channel signaling.非离子型电压门控钙通道信号转导。
Channels (Austin). 2024 Dec;18(1):2341077. doi: 10.1080/19336950.2024.2341077. Epub 2024 Apr 11.
7
The Molecular Mechanism of Ion Selectivity in Nanopores.纳米孔中离子选择性的分子机制
Molecules. 2024 Feb 14;29(4):853. doi: 10.3390/molecules29040853.
8
Anionic Phospholipids Shift the Conformational Equilibrium of the Selectivity Filter in the KcsA Channel to the Conductive Conformation: Predicted Consequences on Inactivation.阴离子磷脂将KcsA通道中选择性过滤器的构象平衡转移至导电构象:对失活的预测结果。
Biomedicines. 2023 May 5;11(5):1376. doi: 10.3390/biomedicines11051376.
9
The cellular pathways that maintain the quality control and transport of diverse potassium channels.维持多种钾离子通道质量控制和运输的细胞途径。
Biochim Biophys Acta Gene Regul Mech. 2023 Mar;1866(1):194908. doi: 10.1016/j.bbagrm.2023.194908. Epub 2023 Jan 10.
10
Mechanisms of ion selectivity and throughput in the mitochondrial calcium uniporter.线粒体钙单向转运体的离子选择性和通透性机制。
Sci Adv. 2022 Dec 16;8(50):eade1516. doi: 10.1126/sciadv.ade1516.
4
Atomic structure of a Na+- and K+-conducting channel.一种钠钾离子传导通道的原子结构。
Nature. 2006 Mar 23;440(7083):570-4. doi: 10.1038/nature04508. Epub 2006 Feb 8.
5
Principles of selective ion transport in channels and pumps.通道和泵中选择性离子转运的原理。
Science. 2005 Dec 2;310(5753):1461-5. doi: 10.1126/science.1113666.
6
Control of ion selectivity in potassium channels by electrostatic and dynamic properties of carbonyl ligands.通过羰基配体的静电和动态特性控制钾通道中的离子选择性
Nature. 2004 Oct 14;431(7010):830-4. doi: 10.1038/nature02943.
7
The CCP4 suite: programs for protein crystallography.CCP4软件包:用于蛋白质晶体学的程序。
Acta Crystallogr D Biol Crystallogr. 1994 Sep 1;50(Pt 5):760-3. doi: 10.1107/S0907444994003112.
8
On the value of c: can low affinity systems be studied by isothermal titration calorimetry?关于c的数值:低亲和力系统能否通过等温滴定量热法进行研究?
J Am Chem Soc. 2003 Dec 3;125(48):14859-66. doi: 10.1021/ja036166s.
9
The occupancy of ions in the K+ selectivity filter: charge balance and coupling of ion binding to a protein conformational change underlie high conduction rates.钾离子选择性过滤器中离子的占据情况:电荷平衡以及离子结合与蛋白质构象变化的偶联是高传导率的基础。
J Mol Biol. 2003 Nov 7;333(5):965-75. doi: 10.1016/j.jmb.2003.09.022.
10
Evolutionarily conserved networks of residues mediate allosteric communication in proteins.进化上保守的残基网络介导蛋白质中的变构通讯。
Nat Struct Biol. 2003 Jan;10(1):59-69. doi: 10.1038/nsb881.