Lamarche Josyanne, Bradley Robert L, Hooper Elaine, Shipley Bill, Simao Beaunoir Anne-Marie, Beaulieu Carole
Laboratoire d'écologie des sols, Département de biologie, Université de Sherbrooke, 2500 Boulevard de l'Université, Sherbrooke, Québec, Canada, J1K 2R1.
Microb Ecol. 2007 Jul;54(1):10-20. doi: 10.1007/s00248-006-9156-3. Epub 2007 May 18.
Bacterial communities mediate many of the processes in boreal forest floors that determine the functioning of these ecosystems, yet it remains uncertain whether the composition of these communities is distributed nonrandomly across the landscape. In a study performed in the southern boreal mixed wood forest of Québec, Canada, we tested the hypothesis that stand type (spruce/fir, aspen, paper birch), stand age (57, 78-85, and 131 years old), and geologic parent material (clay and till) were correlated with forest floor bacterial community composition. Forest floors in 54 independent forest stands were sampled to comprise a full factorial array of the three predictor variables. Bacterial community structure was examined by terminal restriction fragment (T-RF) length polymorphism analysis of genes encoding for 16S rRNA. Distance-based redundancy analysis of T-RF assemblages revealed that each predictor variable, as well as their interaction terms, had a significant effect on bacterial community composition, geologic parent material being the most discriminating factor. A survey of the 15 T-RFs with the highest percentage fit on the first two ordination axes describing the main effects indicated that each landscape feature correlated to a distinct group of bacteria. A survey of the most discriminant T-RFs describing the effect of stand type within each combination of stand age and geologic parent material indicated a strong dependency of several T-RFs on geologic parent material. Given the possible link between bacterial community composition and forest floor functioning, we also assessed the effects of the same three landscape features on community-level catabolic profiles (CLCP) of the extractable forest floor microbiota. Geologic parent material and stand type had significant effects on CLCPs. On clay plots, the effects of landscape features on T-RF patterns were highly consistent with their effects on CLCPs. In light of our results, we suggest that future research examine whether bacterial community composition or CLCPs can be used to detect latent environmental changes across landscape units.
细菌群落介导了北方森林地表的许多过程,这些过程决定了这些生态系统的功能,但这些群落的组成是否在整个景观中呈非随机分布仍不确定。在加拿大魁北克南部北方混交林进行的一项研究中,我们检验了以下假设:林分类型(云杉/冷杉、白杨、纸桦)、林分年龄(57、78 - 85和131年)以及地质母质(粘土和冰碛土)与森林地表细菌群落组成相关。对54个独立林分的森林地表进行采样,以构成这三个预测变量的全因子阵列。通过对编码16S rRNA的基因进行末端限制性片段(T - RF)长度多态性分析来研究细菌群落结构。基于距离的T - RF组合冗余分析表明,每个预测变量及其交互项对细菌群落组成都有显著影响,地质母质是最具区分性的因素。对在前两个排序轴上拟合百分比最高的15个T - RF进行调查,这些排序轴描述了主要影响,结果表明每个景观特征都与不同的细菌组相关。对描述林分年龄和地质母质每种组合内林分类型影响的最具区分性的T - RF进行调查表明,几个T - RF强烈依赖于地质母质。鉴于细菌群落组成与森林地表功能之间可能存在的联系,我们还评估了相同的三个景观特征对可提取森林地表微生物群落水平分解代谢谱(CLCP)的影响。地质母质和林分类型对CLCP有显著影响。在粘土地块上,景观特征对T - RF模式的影响与其对CLCP的影响高度一致。根据我们的研究结果,我们建议未来的研究考察细菌群落组成或CLCP是否可用于检测景观单元间潜在的环境变化。