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新种岛屿德沃斯氏菌,从土壤中分离得到,以及德沃斯氏菌属的修订描述。

Devosia insulae sp. nov., isolated from soil, and emended description of the genus Devosia.

作者信息

Yoon Jung-Hoon, Kang So-Jung, Park Sooyeon, Oh Tae-Kwang

机构信息

Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Korea.

出版信息

Int J Syst Evol Microbiol. 2007 Jun;57(Pt 6):1310-1314. doi: 10.1099/ijs.0.65028-0.

Abstract

A Gram-negative, motile, aerobic and oval- or rod-shaped bacterial strain, DS-56(T), which is phylogenetically closely related to the genus Devosia, was isolated from soil from Dokdo, Korea. Strain DS-56(T) grew optimally at pH 6.5-7.5 and 25 degrees C in the presence of 0.5 % (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain DS-56(T) joins the cluster comprising Devosia species, at a bootstrap resampling value of 100 %. The levels of 16S rRNA gene sequence similarity between strain DS-56(T) and the type strains of recognized Devosia species ranged from 95.4 to 96.4 %. Strain DS-56(T) contained Q-11 as the predominant ubiquinone, unlike Devosia species, which contain Q-10 as the predominant ubiquinone. The novel strain also contained some fatty acids, including branched and hydroxy fatty acids, that are not detected in Devosia species. The DNA G+C content of strain DS-56(T) was 66.2 mol%. On the basis of the phenotypic, chemotaxonomic and phylogenetic data, strain DS-56(T) represents a novel species of the genus Devosia, for which the name Devosia insulae sp. nov. is proposed. The type strain is DS-56(T) (=KCTC 12821(T)=DSM 17955(T)).

摘要

从韩国独岛土壤中分离出一株革兰氏阴性、具运动性、需氧的椭圆形或杆状细菌菌株DS-56(T),它在系统发育上与德沃斯氏菌属密切相关。菌株DS-56(T)在pH 6.5 - 7.5、25℃以及0.5%(w/v)NaCl存在的条件下生长最佳。基于16S rRNA基因序列构建的邻接法系统发育树表明,菌株DS-56(T)以100%的自展重抽样值归入包含德沃斯氏菌属各物种的簇中。菌株DS-56(T)与已确认的德沃斯氏菌属各模式菌株之间的16S rRNA基因序列相似性水平在95.4%至96.4%之间。与以Q-10作为主要泛醌的德沃斯氏菌属物种不同,菌株DS-56(T)以Q-11作为主要泛醌。该新菌株还含有一些在德沃斯氏菌属物种中未检测到的脂肪酸,包括支链脂肪酸和羟基脂肪酸。菌株DS-56(T)的DNA G+C含量为66.2 mol%。基于表型、化学分类学和系统发育数据,菌株DS-56(T)代表德沃斯氏菌属的一个新物种,为此提议将其命名为独岛德沃斯氏菌(Devosia insulae sp. nov.)。模式菌株为DS-56(T)(=KCTC 12821(T)=DSM 17955(T))。

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