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数字病理学:符合DICOM的草案、测试平台及初步结果。

Digital pathology: DICOM-conform draft, testbed, and first results.

作者信息

Zwönitzer Ralf, Kalinski Thomas, Hofmann Harald, Roessner Albert, Bernarding Johannes

机构信息

Department of Biometry and Medical Informatics, Otto-von-Guericke-University, Magdeburg, Leipziger Str. 44, D-39120 Magdeburg, Germany.

出版信息

Comput Methods Programs Biomed. 2007 Sep;87(3):181-8. doi: 10.1016/j.cmpb.2007.05.010. Epub 2007 Jul 5.

Abstract

Hospital information systems are state of the art nowadays. Therefore, Digital Pathology, also labelled as Virtual Microscopy, has gained increased attention. Triggered by radiology, standardized information models and workflows were world-wide defined based on DICOM. However, DICOM-conform integration of Digital Pathology into existing clinical information systems imposes new problems requiring specific solutions concerning the huge amount of data as well as the special structure of the data to be managed, transferred, and stored. We implemented a testbed to realize and evaluate the workflow of digitized slides from acquisition to archiving. The experiences led to the draft of a DICOM-conform information model that accounted for extensions, definitions, and technical requirements necessary to integrate digital pathology in a hospital-wide DICOM environment. Slides were digitized, compressed, and could be viewed remotely. Real-time transfer of the huge amount of data was optimized using streaming techniques. Compared to a recent discussion in the DICOM Working Group for Digital Pathology (WG26) our experiences led to a preference of a JPEG2000/JPIP-based streaming of the whole slide image. The results showed that digital pathology is feasible but strong efforts by users and vendors are still necessary to integrate Digital Pathology into existing information systems.

摘要

医院信息系统如今已达到先进水平。因此,数字病理学(也称为虚拟显微镜)受到了越来越多的关注。受放射学的启发,基于DICOM在全球范围内定义了标准化信息模型和工作流程。然而,将数字病理学与DICOM标准集成到现有的临床信息系统中带来了新问题,需要针对要管理、传输和存储的大量数据以及数据的特殊结构提供特定解决方案。我们搭建了一个试验台来实现和评估数字化切片从采集到存档的工作流程。这些经验促成了一个符合DICOM标准的信息模型草案,该模型考虑了在全院范围的DICOM环境中集成数字病理学所需的扩展、定义和技术要求。切片被数字化、压缩,并可以远程查看。使用流技术优化了大量数据的实时传输。与数字病理学DICOM工作组(WG26)最近的讨论相比,我们的经验表明更倾向于基于JPEG2000/JPIP的全切片图像流。结果表明数字病理学是可行的,但用户和供应商仍需付出巨大努力才能将数字病理学集成到现有信息系统中。

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