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深入了解广谱嗜盐菌盐脱氮副球菌中海藻糖 2,6-二羟酸的合成及其转录调控。

New insights into hydroxyectoine synthesis and its transcriptional regulation in the broad-salt growing halophilic bacterium Chromohalobacter salexigens.

机构信息

Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, C/ Profesor García González, 2, Sevilla, 41012, Spain.

出版信息

Microb Biotechnol. 2021 Jul;14(4):1472-1493. doi: 10.1111/1751-7915.13799. Epub 2021 May 6.

Abstract

Elucidating the mechanisms controlling the synthesis of hydroxyectoine is important to design novel genetic engineering strategies for optimizing the production of this biotechnologically relevant compatible solute. The genome of the halophilic bacterium Chromohalobacter salexigens carries two ectoine hydroxylase genes, namely ectD and ectE, whose encoded proteins share the characteristic consensus motif of ectoine hydroxylases but showed only a 51.9% identity between them. In this work, we have shown that ectE encodes a secondary functional ectoine hydroxylase and that the hydroxyectoine synthesis mediated by this enzyme contributes to C.␣salexigens thermoprotection. The evolutionary pattern of EctD and EctE and related proteins suggests that they may have arisen from duplication of an ancestral gene preceding the directional divergence that gave origin to the orders Oceanospirillales and Alteromonadales. Osmoregulated expression of ectD at exponential phase, as well as the thermoregulated expression of ectD at the stationary phase, seemed to be dependent on the general stress factor RpoS. In contrast, expression of ectE was always RpoS-dependent regardless of the growth phase and osmotic or heat stress conditions tested. The data presented here suggest that the AraC-GlxA-like EctZ transcriptional regulator, whose encoding gene lies upstream of ectD, plays a dual function under exponential growth as both a transcriptional activator of osmoregulated ectD expression and a repressor of ectE transcription, privileging the synthesis of the main ectoine hydroxylase EctD. Inactivation of ectZ resulted in a higher amount of the total ectoines pool at the expenses of a higher accumulation of ectoine, with maintenance of the hydroxyectoine levels. In addition to the transcriptional control, our results suggest a strong post-transcriptional regulation of hydroxyectoine synthesis. Data on the accumulation of ectoine and hydroxyectoine in rpoS and ectZ strains pave the way for using these genetic backgrounds for metabolic engineering for hydroxyectoine production.

摘要

阐明控制羟基甜菜碱合成的机制对于设计新型遗传工程策略以优化这种具有生物技术相关性的相容溶质的生产非常重要。嗜盐细菌 Chromohalobacter salexigens 的基因组携带有两个甜菜碱羟化酶基因,即 ectD 和 ectE,它们编码的蛋白质共享甜菜碱羟化酶的特征共识基序,但它们之间的同一性仅为 51.9%。在这项工作中,我们表明 ectE 编码一种次要的功能性甜菜碱羟化酶,并且该酶介导的羟基甜菜碱合成有助于 C. salexigens 的耐热性。EctD 和 EctE 及相关蛋白的进化模式表明,它们可能是在导致 Oceanospirillales 和 Alteromonadales 目定向分化之前的祖先基因复制产生的。ectD 在指数生长期的渗透压调节表达,以及 ectD 在静止期的热调节表达,似乎都依赖于普遍应激因子 RpoS。相比之下,ectE 的表达始终依赖于 RpoS,无论所测试的生长阶段、渗透压或热应激条件如何。这里呈现的数据表明,AraC-GlxA 样 EctZ 转录调节剂,其编码基因位于 ectD 的上游,在指数生长时具有双重功能,既是渗透压调节 ectD 表达的转录激活子,也是 ectE 转录的抑制剂,优先合成主要的甜菜碱羟化酶 EctD。ectZ 的失活导致总甜菜碱量的增加,而以更高的积累为代价,羟基甜菜碱的水平得以维持。除了转录控制之外,我们的结果还表明羟基甜菜碱合成存在强烈的转录后调控。rpoS 和 ectZ 菌株中甜菜碱和羟基甜菜碱积累的数据为利用这些遗传背景进行羟基甜菜碱生产的代谢工程铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d50e/8313267/36276640910b/MBT2-14-1472-g010.jpg

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